RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
GCN1-205ENST00000548821 TNP1P09430 55 aa3.51□□□□□ -1.85
GCN1-205ENST00000548821 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
GCN1-205ENST00000548821 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
GCN1-205ENST00000548821 H7BZZ5 65 aa3.49□□□□□ -1.85
GCN1-205ENST00000548821 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
GCN1-205ENST00000548821 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
GCN1-205ENST00000548821 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
GCN1-205ENST00000548821 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
GCN1-205ENST00000548821 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
GCN1-205ENST00000548821 MT1MQ8N339 61 aa3.41□□□□□ -1.86
GCN1-205ENST00000548821 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
GCN1-205ENST00000548821 MT1LQ93083 61 aa3.39□□□□□ -1.87
GCN1-205ENST00000548821 A8MU10 97 aa3.38□□□□□ -1.87
GCN1-205ENST00000548821 MT4P47944 62 aa3.37□□□□□ -1.87
GCN1-205ENST00000548821 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
GCN1-205ENST00000548821 UQCR11O14957 56 aa3.34□□□□□ -1.87
GCN1-205ENST00000548821 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
GCN1-205ENST00000548821 K7ERS5 55 aa3.32□□□□□ -1.88
GCN1-205ENST00000548821 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
GCN1-205ENST00000548821 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
GCN1-205ENST00000548821 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
GCN1-205ENST00000548821 KRTAP25-1Q3LHN0 102 aa3.26□□□□□ -1.89
GCN1-205ENST00000548821 CCDC179H3BU77 68 aa3.24□□□□□ -1.89
GCN1-205ENST00000548821 TMEM258P61165 79 aa3.24□□□□□ -1.89
GCN1-205ENST00000548821 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
GCN1-205ENST00000548821 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
GCN1-205ENST00000548821 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
GCN1-205ENST00000548821 V9GYY9 64 aa3.2□□□□□ -1.9
GCN1-205ENST00000548821 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
GCN1-205ENST00000548821 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
GCN1-205ENST00000548821 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
GCN1-205ENST00000548821 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
GCN1-205ENST00000548821 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
GCN1-205ENST00000548821 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
GCN1-205ENST00000548821 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
GCN1-205ENST00000548821 Q1T7F1 81 aa3.05□□□□□ -1.92
GCN1-205ENST00000548821 PSPHP1O15172 72 aa3.04□□□□□ -1.92
GCN1-205ENST00000548821 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
GCN1-205ENST00000548821 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
GCN1-205ENST00000548821 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
GCN1-205ENST00000548821 A6NED7 52 aa3□□□□□ -1.93
GCN1-205ENST00000548821 MT3P25713 68 aa2.98□□□□□ -1.93
GCN1-205ENST00000548821 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.93
GCN1-205ENST00000548821 ROMO1P60602 79 aa2.94□□□□□ -1.94
GCN1-205ENST00000548821 MT1AP04731 61 aa2.92□□□□□ -1.94
GCN1-205ENST00000548821 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
GCN1-205ENST00000548821 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
GCN1-205ENST00000548821 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
GCN1-205ENST00000548821 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
GCN1-205ENST00000548821 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
GCN1-205ENST00000548821 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
GCN1-205ENST00000548821 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
GCN1-205ENST00000548821 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
GCN1-205ENST00000548821 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
GCN1-205ENST00000548821 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
GCN1-205ENST00000548821 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
GCN1-205ENST00000548821 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
GCN1-205ENST00000548821 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
GCN1-205ENST00000548821 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
GCN1-205ENST00000548821 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
GCN1-205ENST00000548821 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
GCN1-205ENST00000548821 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
GCN1-205ENST00000548821 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
GCN1-205ENST00000548821 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
GCN1-205ENST00000548821 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
GCN1-205ENST00000548821 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
GCN1-205ENST00000548821 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
GCN1-205ENST00000548821 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
GCN1-205ENST00000548821 PRO0628Q9UI54 55 aa2.02□□□□□ -2.09
GCN1-205ENST00000548821 KTN1-AS1Q86SY8 53 aa1.96□□□□□ -2.1
GCN1-205ENST00000548821 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
GCN1-205ENST00000548821 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
GCN1-205ENST00000548821 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
GCN1-205ENST00000548821 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
GCN1-205ENST00000548821 PRM1P04553 51 aa1.44□□□□□ -2.18
GCN1-205ENST00000548821 INE1O15225 51 aa1.19□□□□□ -2.22
GCN1-205ENST00000548821 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 159.6 ms