RNA–Protein interactions for RNA: ENST00000548733.1

NR4A1-210, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 535 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-210ENST00000548733 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
NR4A1-210ENST00000548733 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
NR4A1-210ENST00000548733 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
NR4A1-210ENST00000548733 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
NR4A1-210ENST00000548733 MT1GP13640 62 aa4.43□□□□□ -1.7
NR4A1-210ENST00000548733 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
NR4A1-210ENST00000548733 MT1LQ93083 61 aa4.42□□□□□ -1.7
NR4A1-210ENST00000548733 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
NR4A1-210ENST00000548733 MT1MQ8N339 61 aa4.36□□□□□ -1.71
NR4A1-210ENST00000548733 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
NR4A1-210ENST00000548733 ROMO1P60602 79 aa4.35□□□□□ -1.71
NR4A1-210ENST00000548733 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
NR4A1-210ENST00000548733 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
NR4A1-210ENST00000548733 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
NR4A1-210ENST00000548733 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
NR4A1-210ENST00000548733 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
NR4A1-210ENST00000548733 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
NR4A1-210ENST00000548733 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
NR4A1-210ENST00000548733 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
NR4A1-210ENST00000548733 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
NR4A1-210ENST00000548733 LCE4AQ5TA78 99 aa4.1□□□□□ -1.75
NR4A1-210ENST00000548733 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
NR4A1-210ENST00000548733 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
NR4A1-210ENST00000548733 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
NR4A1-210ENST00000548733 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
NR4A1-210ENST00000548733 MT4P47944 62 aa4.02□□□□□ -1.77
NR4A1-210ENST00000548733 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
NR4A1-210ENST00000548733 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
NR4A1-210ENST00000548733 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
NR4A1-210ENST00000548733 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
NR4A1-210ENST00000548733 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
NR4A1-210ENST00000548733 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
NR4A1-210ENST00000548733 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
NR4A1-210ENST00000548733 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
NR4A1-210ENST00000548733 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
NR4A1-210ENST00000548733 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
NR4A1-210ENST00000548733 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
NR4A1-210ENST00000548733 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
NR4A1-210ENST00000548733 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
NR4A1-210ENST00000548733 MT1AP04731 61 aa3.78□□□□□ -1.8
NR4A1-210ENST00000548733 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
NR4A1-210ENST00000548733 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
NR4A1-210ENST00000548733 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
NR4A1-210ENST00000548733 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
NR4A1-210ENST00000548733 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
NR4A1-210ENST00000548733 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
NR4A1-210ENST00000548733 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
NR4A1-210ENST00000548733 MT3P25713 68 aa3.44□□□□□ -1.86
NR4A1-210ENST00000548733 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
NR4A1-210ENST00000548733 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
NR4A1-210ENST00000548733 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
NR4A1-210ENST00000548733 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
NR4A1-210ENST00000548733 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
NR4A1-210ENST00000548733 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
NR4A1-210ENST00000548733 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
NR4A1-210ENST00000548733 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
NR4A1-210ENST00000548733 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
NR4A1-210ENST00000548733 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
NR4A1-210ENST00000548733 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
NR4A1-210ENST00000548733 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
NR4A1-210ENST00000548733 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
NR4A1-210ENST00000548733 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
NR4A1-210ENST00000548733 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
NR4A1-210ENST00000548733 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
NR4A1-210ENST00000548733 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
NR4A1-210ENST00000548733 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
NR4A1-210ENST00000548733 H3BS24 57 aa2.64□□□□□ -1.99
NR4A1-210ENST00000548733 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
NR4A1-210ENST00000548733 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
NR4A1-210ENST00000548733 INE1O15225 51 aa2.5□□□□□ -2.01
NR4A1-210ENST00000548733 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
NR4A1-210ENST00000548733 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
NR4A1-210ENST00000548733 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
NR4A1-210ENST00000548733 PRM1P04553 51 aa2.24□□□□□ -2.05
NR4A1-210ENST00000548733 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
NR4A1-210ENST00000548733 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
NR4A1-210ENST00000548733 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
NR4A1-210ENST00000548733 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms