RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
USP15-208ENST00000548524 A0A1B0GU69 56 aa3.69□□□□□ -1.82
USP15-208ENST00000548524 SPRR2DP22532 72 aa3.69□□□□□ -1.82
USP15-208ENST00000548524 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
USP15-208ENST00000548524 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
USP15-208ENST00000548524 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
USP15-208ENST00000548524 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
USP15-208ENST00000548524 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
USP15-208ENST00000548524 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
USP15-208ENST00000548524 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
USP15-208ENST00000548524 A8MU10 97 aa3.59□□□□□ -1.83
USP15-208ENST00000548524 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
USP15-208ENST00000548524 MT1EP04732 61 aa3.53□□□□□ -1.84
USP15-208ENST00000548524 TMEM258P61165 79 aa3.53□□□□□ -1.84
USP15-208ENST00000548524 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
USP15-208ENST00000548524 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
USP15-208ENST00000548524 TNP1P09430 55 aa3.49□□□□□ -1.85
USP15-208ENST00000548524 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
USP15-208ENST00000548524 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
USP15-208ENST00000548524 UQCR11O14957 56 aa3.46□□□□□ -1.86
USP15-208ENST00000548524 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
USP15-208ENST00000548524 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
USP15-208ENST00000548524 MT1GP13640 62 aa3.42□□□□□ -1.86
USP15-208ENST00000548524 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
USP15-208ENST00000548524 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
USP15-208ENST00000548524 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
USP15-208ENST00000548524 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
USP15-208ENST00000548524 MT1LQ93083 61 aa3.38□□□□□ -1.87
USP15-208ENST00000548524 MT1MQ8N339 61 aa3.36□□□□□ -1.87
USP15-208ENST00000548524 V9GYY9 64 aa3.36□□□□□ -1.87
USP15-208ENST00000548524 K7ERS5 55 aa3.35□□□□□ -1.87
USP15-208ENST00000548524 PSPHP1O15172 72 aa3.34□□□□□ -1.87
USP15-208ENST00000548524 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
USP15-208ENST00000548524 Q1T7F1 81 aa3.31□□□□□ -1.88
USP15-208ENST00000548524 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
USP15-208ENST00000548524 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
USP15-208ENST00000548524 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
USP15-208ENST00000548524 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
USP15-208ENST00000548524 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
USP15-208ENST00000548524 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
USP15-208ENST00000548524 A6NED7 52 aa3.24□□□□□ -1.89
USP15-208ENST00000548524 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
USP15-208ENST00000548524 MT4P47944 62 aa3.22□□□□□ -1.89
USP15-208ENST00000548524 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
USP15-208ENST00000548524 RPS28P62857 69 aaKnown RBP3.15□□□□□ -1.91
USP15-208ENST00000548524 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
USP15-208ENST00000548524 ROMO1P60602 79 aa3.1□□□□□ -1.91
USP15-208ENST00000548524 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
USP15-208ENST00000548524 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
USP15-208ENST00000548524 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
USP15-208ENST00000548524 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
USP15-208ENST00000548524 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
USP15-208ENST00000548524 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
USP15-208ENST00000548524 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
USP15-208ENST00000548524 MT1AP04731 61 aa2.88□□□□□ -1.95
USP15-208ENST00000548524 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
USP15-208ENST00000548524 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
USP15-208ENST00000548524 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
USP15-208ENST00000548524 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
USP15-208ENST00000548524 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
USP15-208ENST00000548524 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
USP15-208ENST00000548524 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
USP15-208ENST00000548524 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
USP15-208ENST00000548524 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
USP15-208ENST00000548524 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
USP15-208ENST00000548524 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
USP15-208ENST00000548524 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
USP15-208ENST00000548524 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
USP15-208ENST00000548524 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
USP15-208ENST00000548524 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
USP15-208ENST00000548524 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
USP15-208ENST00000548524 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
USP15-208ENST00000548524 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
USP15-208ENST00000548524 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
USP15-208ENST00000548524 PRM1P04553 51 aa1.59□□□□□ -2.15
USP15-208ENST00000548524 INE1O15225 51 aa1.42□□□□□ -2.18
USP15-208ENST00000548524 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
USP15-208ENST00000548524 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms