RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 TNP1P09430 55 aa5.44□□□□□ -1.54
TROAP-207ENST00000548311 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
TROAP-207ENST00000548311 MT1MQ8N339 61 aa5.44□□□□□ -1.54
TROAP-207ENST00000548311 MT1LQ93083 61 aa5.44□□□□□ -1.54
TROAP-207ENST00000548311 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
TROAP-207ENST00000548311 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
TROAP-207ENST00000548311 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
TROAP-207ENST00000548311 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
TROAP-207ENST00000548311 MT4P47944 62 aa5.34□□□□□ -1.55
TROAP-207ENST00000548311 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
TROAP-207ENST00000548311 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
TROAP-207ENST00000548311 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
TROAP-207ENST00000548311 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
TROAP-207ENST00000548311 UQCR11O14957 56 aa5.22□□□□□ -1.57
TROAP-207ENST00000548311 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
TROAP-207ENST00000548311 TMEM258P61165 79 aa5.19□□□□□ -1.58
TROAP-207ENST00000548311 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
TROAP-207ENST00000548311 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
TROAP-207ENST00000548311 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
TROAP-207ENST00000548311 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
TROAP-207ENST00000548311 K7ERS5 55 aa5.05□□□□□ -1.6
TROAP-207ENST00000548311 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
TROAP-207ENST00000548311 PSPHP1O15172 72 aa4.98□□□□□ -1.61
TROAP-207ENST00000548311 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
TROAP-207ENST00000548311 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
TROAP-207ENST00000548311 V9GYY9 64 aa4.93□□□□□ -1.62
TROAP-207ENST00000548311 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
TROAP-207ENST00000548311 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
TROAP-207ENST00000548311 Q1T7F1 81 aa4.87□□□□□ -1.63
TROAP-207ENST00000548311 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
TROAP-207ENST00000548311 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
TROAP-207ENST00000548311 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
TROAP-207ENST00000548311 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
TROAP-207ENST00000548311 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
TROAP-207ENST00000548311 A6NED7 52 aa4.81□□□□□ -1.64
TROAP-207ENST00000548311 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
TROAP-207ENST00000548311 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
TROAP-207ENST00000548311 ROMO1P60602 79 aa4.67□□□□□ -1.66
TROAP-207ENST00000548311 PCP4P48539 62 aa4.64□□□□□ -1.67
TROAP-207ENST00000548311 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
TROAP-207ENST00000548311 MT1AP04731 61 aa4.62□□□□□ -1.67
TROAP-207ENST00000548311 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
TROAP-207ENST00000548311 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
TROAP-207ENST00000548311 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
TROAP-207ENST00000548311 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
TROAP-207ENST00000548311 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
TROAP-207ENST00000548311 H3BS24 57 aa4.41□□□□□ -1.7
TROAP-207ENST00000548311 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
TROAP-207ENST00000548311 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TROAP-207ENST00000548311 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
TROAP-207ENST00000548311 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
TROAP-207ENST00000548311 MT3P25713 68 aa4.24□□□□□ -1.73
TROAP-207ENST00000548311 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
TROAP-207ENST00000548311 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
TROAP-207ENST00000548311 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
TROAP-207ENST00000548311 BRK1Q8WUW1 75 aa4□□□□□ -1.77
TROAP-207ENST00000548311 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
TROAP-207ENST00000548311 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TROAP-207ENST00000548311 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
TROAP-207ENST00000548311 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
TROAP-207ENST00000548311 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
TROAP-207ENST00000548311 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
TROAP-207ENST00000548311 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
TROAP-207ENST00000548311 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
TROAP-207ENST00000548311 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
TROAP-207ENST00000548311 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
TROAP-207ENST00000548311 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
TROAP-207ENST00000548311 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TROAP-207ENST00000548311 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TROAP-207ENST00000548311 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
TROAP-207ENST00000548311 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
TROAP-207ENST00000548311 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
TROAP-207ENST00000548311 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
TROAP-207ENST00000548311 INE1O15225 51 aa2.54□□□□□ -2
TROAP-207ENST00000548311 PRM1P04553 51 aa2.39□□□□□ -2.03
TROAP-207ENST00000548311 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
TROAP-207ENST00000548311 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 45.9 ms