RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 A0A1B0GU69 56 aa6.99□□□□□ -1.29
SSH1-207ENST00000547862 COX7CP15954 63 aa6.95□□□□□ -1.3
SSH1-207ENST00000547862 H7BZZ5 65 aa6.93□□□□□ -1.3
SSH1-207ENST00000547862 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
SSH1-207ENST00000547862 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
SSH1-207ENST00000547862 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
SSH1-207ENST00000547862 KRTAP5-7Q6L8G8 165 aa6.75□□□□□ -1.33
SSH1-207ENST00000547862 KRTAP20-2Q3LI61 65 aa6.74□□□□□ -1.33
SSH1-207ENST00000547862 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
SSH1-207ENST00000547862 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
SSH1-207ENST00000547862 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
SSH1-207ENST00000547862 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
SSH1-207ENST00000547862 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
SSH1-207ENST00000547862 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SSH1-207ENST00000547862 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
SSH1-207ENST00000547862 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
SSH1-207ENST00000547862 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
SSH1-207ENST00000547862 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
SSH1-207ENST00000547862 UQCR11O14957 56 aa6.41□□□□□ -1.38
SSH1-207ENST00000547862 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
SSH1-207ENST00000547862 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
SSH1-207ENST00000547862 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
SSH1-207ENST00000547862 K7ERS5 55 aa6.21□□□□□ -1.42
SSH1-207ENST00000547862 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
SSH1-207ENST00000547862 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
SSH1-207ENST00000547862 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
SSH1-207ENST00000547862 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.42
SSH1-207ENST00000547862 TMEM258P61165 79 aa6.14□□□□□ -1.43
SSH1-207ENST00000547862 MT1AP04731 61 aa6.13□□□□□ -1.43
SSH1-207ENST00000547862 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
SSH1-207ENST00000547862 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
SSH1-207ENST00000547862 PSPHP1O15172 72 aa6.01□□□□□ -1.45
SSH1-207ENST00000547862 KRTAP5-8O75690 187 aa6□□□□□ -1.45
SSH1-207ENST00000547862 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
SSH1-207ENST00000547862 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
SSH1-207ENST00000547862 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
SSH1-207ENST00000547862 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
SSH1-207ENST00000547862 MUC5ACP98088 5654 aa5.88□□□□□ -1.47
SSH1-207ENST00000547862 AHNAKQ09666 5890 aaKnown RBP5.88□□□□□ -1.47
SSH1-207ENST00000547862 V9GYY9 64 aa5.86□□□□□ -1.47
SSH1-207ENST00000547862 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
SSH1-207ENST00000547862 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
SSH1-207ENST00000547862 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
SSH1-207ENST00000547862 RPS28P62857 69 aaKnown RBP5.8□□□□□ -1.48
SSH1-207ENST00000547862 Q1T7F1 81 aa5.79□□□□□ -1.48
SSH1-207ENST00000547862 A6NED7 52 aa5.78□□□□□ -1.48
SSH1-207ENST00000547862 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
SSH1-207ENST00000547862 ROMO1P60602 79 aa5.72□□□□□ -1.49
SSH1-207ENST00000547862 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
SSH1-207ENST00000547862 MT3P25713 68 aa5.6□□□□□ -1.51
SSH1-207ENST00000547862 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
SSH1-207ENST00000547862 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
SSH1-207ENST00000547862 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
SSH1-207ENST00000547862 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
SSH1-207ENST00000547862 PCP4P48539 62 aa5.01□□□□□ -1.61
SSH1-207ENST00000547862 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
SSH1-207ENST00000547862 H3BS24 57 aa4.6□□□□□ -1.67
SSH1-207ENST00000547862 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
SSH1-207ENST00000547862 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
SSH1-207ENST00000547862 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SSH1-207ENST00000547862 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
SSH1-207ENST00000547862 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
SSH1-207ENST00000547862 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
SSH1-207ENST00000547862 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
SSH1-207ENST00000547862 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
SSH1-207ENST00000547862 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
SSH1-207ENST00000547862 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
SSH1-207ENST00000547862 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
SSH1-207ENST00000547862 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
SSH1-207ENST00000547862 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SSH1-207ENST00000547862 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
SSH1-207ENST00000547862 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
SSH1-207ENST00000547862 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
SSH1-207ENST00000547862 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
SSH1-207ENST00000547862 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
SSH1-207ENST00000547862 PRM1P04553 51 aa2.95□□□□□ -1.94
SSH1-207ENST00000547862 INE1O15225 51 aa2.7□□□□□ -1.98
SSH1-207ENST00000547862 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms