RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
SCRIB-208ENST00000546337 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
SCRIB-208ENST00000546337 MT1GP13640 62 aa5.69□□□□□ -1.5
SCRIB-208ENST00000546337 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
SCRIB-208ENST00000546337 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
SCRIB-208ENST00000546337 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
SCRIB-208ENST00000546337 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
SCRIB-208ENST00000546337 MT1LQ93083 61 aa5.6□□□□□ -1.51
SCRIB-208ENST00000546337 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
SCRIB-208ENST00000546337 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
SCRIB-208ENST00000546337 MT1MQ8N339 61 aa5.52□□□□□ -1.53
SCRIB-208ENST00000546337 ROMO1P60602 79 aa5.51□□□□□ -1.53
SCRIB-208ENST00000546337 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
SCRIB-208ENST00000546337 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
SCRIB-208ENST00000546337 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
SCRIB-208ENST00000546337 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
SCRIB-208ENST00000546337 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
SCRIB-208ENST00000546337 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
SCRIB-208ENST00000546337 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
SCRIB-208ENST00000546337 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
SCRIB-208ENST00000546337 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
SCRIB-208ENST00000546337 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
SCRIB-208ENST00000546337 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
SCRIB-208ENST00000546337 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
SCRIB-208ENST00000546337 MT4P47944 62 aa5.03□□□□□ -1.6
SCRIB-208ENST00000546337 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
SCRIB-208ENST00000546337 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
SCRIB-208ENST00000546337 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
SCRIB-208ENST00000546337 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
SCRIB-208ENST00000546337 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SCRIB-208ENST00000546337 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
SCRIB-208ENST00000546337 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
SCRIB-208ENST00000546337 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SCRIB-208ENST00000546337 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
SCRIB-208ENST00000546337 MT1AP04731 61 aa4.8□□□□□ -1.64
SCRIB-208ENST00000546337 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
SCRIB-208ENST00000546337 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
SCRIB-208ENST00000546337 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
SCRIB-208ENST00000546337 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
SCRIB-208ENST00000546337 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
SCRIB-208ENST00000546337 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
SCRIB-208ENST00000546337 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
SCRIB-208ENST00000546337 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
SCRIB-208ENST00000546337 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
SCRIB-208ENST00000546337 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
SCRIB-208ENST00000546337 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
SCRIB-208ENST00000546337 MT3P25713 68 aa4.42□□□□□ -1.7
SCRIB-208ENST00000546337 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SCRIB-208ENST00000546337 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
SCRIB-208ENST00000546337 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
SCRIB-208ENST00000546337 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
SCRIB-208ENST00000546337 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
SCRIB-208ENST00000546337 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SCRIB-208ENST00000546337 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
SCRIB-208ENST00000546337 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
SCRIB-208ENST00000546337 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
SCRIB-208ENST00000546337 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
SCRIB-208ENST00000546337 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
SCRIB-208ENST00000546337 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
SCRIB-208ENST00000546337 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
SCRIB-208ENST00000546337 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
SCRIB-208ENST00000546337 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SCRIB-208ENST00000546337 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SCRIB-208ENST00000546337 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
SCRIB-208ENST00000546337 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SCRIB-208ENST00000546337 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
SCRIB-208ENST00000546337 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SCRIB-208ENST00000546337 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SCRIB-208ENST00000546337 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SCRIB-208ENST00000546337 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
SCRIB-208ENST00000546337 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
SCRIB-208ENST00000546337 INE1O15225 51 aa2.82□□□□□ -1.96
SCRIB-208ENST00000546337 PRM1P04553 51 aa2.76□□□□□ -1.97
SCRIB-208ENST00000546337 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SCRIB-208ENST00000546337 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SCRIB-208ENST00000546337 H3BS24 57 aa2.61□□□□□ -1.99
SCRIB-208ENST00000546337 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
SCRIB-208ENST00000546337 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms