RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 TMEM258P61165 79 aa4.23□□□□□ -1.73
TMEM258-208ENST00000545210 A0A1B0GU69 56 aa4.22□□□□□ -1.73
TMEM258-208ENST00000545210 MT1GP13640 62 aa4.18□□□□□ -1.74
TMEM258-208ENST00000545210 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
TMEM258-208ENST00000545210 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
TMEM258-208ENST00000545210 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
TMEM258-208ENST00000545210 A8MU10 97 aa4.15□□□□□ -1.75
TMEM258-208ENST00000545210 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
TMEM258-208ENST00000545210 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
TMEM258-208ENST00000545210 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
TMEM258-208ENST00000545210 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
TMEM258-208ENST00000545210 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
TMEM258-208ENST00000545210 MT1MQ8N339 61 aa4.12□□□□□ -1.75
TMEM258-208ENST00000545210 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
TMEM258-208ENST00000545210 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
TMEM258-208ENST00000545210 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
TMEM258-208ENST00000545210 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
TMEM258-208ENST00000545210 V9GYY9 64 aa4.05□□□□□ -1.76
TMEM258-208ENST00000545210 MT1LQ93083 61 aa4.04□□□□□ -1.76
TMEM258-208ENST00000545210 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
TMEM258-208ENST00000545210 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
TMEM258-208ENST00000545210 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
TMEM258-208ENST00000545210 PSPHP1O15172 72 aa4□□□□□ -1.77
TMEM258-208ENST00000545210 UQCR11O14957 56 aa3.98□□□□□ -1.77
TMEM258-208ENST00000545210 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
TMEM258-208ENST00000545210 Q1T7F1 81 aa3.95□□□□□ -1.78
TMEM258-208ENST00000545210 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
TMEM258-208ENST00000545210 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
TMEM258-208ENST00000545210 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
TMEM258-208ENST00000545210 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
TMEM258-208ENST00000545210 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
TMEM258-208ENST00000545210 TNP1P09430 55 aa3.85□□□□□ -1.79
TMEM258-208ENST00000545210 A6NED7 52 aa3.84□□□□□ -1.79
TMEM258-208ENST00000545210 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
TMEM258-208ENST00000545210 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
TMEM258-208ENST00000545210 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
TMEM258-208ENST00000545210 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
TMEM258-208ENST00000545210 K7ERS5 55 aa3.78□□□□□ -1.8
TMEM258-208ENST00000545210 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
TMEM258-208ENST00000545210 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
TMEM258-208ENST00000545210 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
TMEM258-208ENST00000545210 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
TMEM258-208ENST00000545210 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
TMEM258-208ENST00000545210 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
TMEM258-208ENST00000545210 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
TMEM258-208ENST00000545210 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
TMEM258-208ENST00000545210 ROMO1P60602 79 aa3.6□□□□□ -1.83
TMEM258-208ENST00000545210 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
TMEM258-208ENST00000545210 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
TMEM258-208ENST00000545210 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
TMEM258-208ENST00000545210 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
TMEM258-208ENST00000545210 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
TMEM258-208ENST00000545210 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
TMEM258-208ENST00000545210 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
TMEM258-208ENST00000545210 MT1AP04731 61 aa3.42□□□□□ -1.86
TMEM258-208ENST00000545210 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
TMEM258-208ENST00000545210 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
TMEM258-208ENST00000545210 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
TMEM258-208ENST00000545210 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
TMEM258-208ENST00000545210 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
TMEM258-208ENST00000545210 MT3P25713 68 aa3.21□□□□□ -1.9
TMEM258-208ENST00000545210 KTN1-AS1Q86SY8 53 aa3.15□□□□□ -1.91
TMEM258-208ENST00000545210 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
TMEM258-208ENST00000545210 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
TMEM258-208ENST00000545210 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TMEM258-208ENST00000545210 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
TMEM258-208ENST00000545210 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
TMEM258-208ENST00000545210 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
TMEM258-208ENST00000545210 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
TMEM258-208ENST00000545210 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
TMEM258-208ENST00000545210 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
TMEM258-208ENST00000545210 INE1O15225 51 aa2.37□□□□□ -2.03
TMEM258-208ENST00000545210 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
TMEM258-208ENST00000545210 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
TMEM258-208ENST00000545210 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
TMEM258-208ENST00000545210 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
TMEM258-208ENST00000545210 PRM1P04553 51 aa1.88□□□□□ -2.11
TMEM258-208ENST00000545210 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 31.8 ms