RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 LCE1FQ5T754 118 aa5.73□□□□□ -1.49
BPTF-208ENST00000544778 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
BPTF-208ENST00000544778 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
BPTF-208ENST00000544778 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
BPTF-208ENST00000544778 MT1AP04731 61 aa5.62□□□□□ -1.51
BPTF-208ENST00000544778 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
BPTF-208ENST00000544778 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
BPTF-208ENST00000544778 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
BPTF-208ENST00000544778 RYR2Q92736 4967 aa5.56□□□□□ -1.52
BPTF-208ENST00000544778 LRP2P98164 4655 aa5.56□□□□□ -1.52
BPTF-208ENST00000544778 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
BPTF-208ENST00000544778 SYNE2Q8WXH0 6885 aaKnown RBP5.54□□□□□ -1.52
BPTF-208ENST00000544778 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
BPTF-208ENST00000544778 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
BPTF-208ENST00000544778 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
BPTF-208ENST00000544778 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
BPTF-208ENST00000544778 HERC2O95714 4834 aa5.41□□□□□ -1.54
BPTF-208ENST00000544778 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
BPTF-208ENST00000544778 HERC1Q15751 4861 aa5.37□□□□□ -1.55
BPTF-208ENST00000544778 KMT2CQ8NEZ4 4911 aaKnown RBP5.36□□□□□ -1.55
BPTF-208ENST00000544778 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
BPTF-208ENST00000544778 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
BPTF-208ENST00000544778 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
BPTF-208ENST00000544778 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
BPTF-208ENST00000544778 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
BPTF-208ENST00000544778 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
BPTF-208ENST00000544778 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
BPTF-208ENST00000544778 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
BPTF-208ENST00000544778 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
BPTF-208ENST00000544778 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
BPTF-208ENST00000544778 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
BPTF-208ENST00000544778 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
BPTF-208ENST00000544778 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
BPTF-208ENST00000544778 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
BPTF-208ENST00000544778 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
BPTF-208ENST00000544778 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
BPTF-208ENST00000544778 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
BPTF-208ENST00000544778 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
BPTF-208ENST00000544778 FAT4Q6V0I7 4981 aa4.64□□□□□ -1.67
BPTF-208ENST00000544778 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
BPTF-208ENST00000544778 MUC2Q02817 5179 aa4.56□□□□□ -1.68
BPTF-208ENST00000544778 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
BPTF-208ENST00000544778 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
BPTF-208ENST00000544778 KRTAP4-4Q9BYR3 166 aa4.44□□□□□ -1.7
BPTF-208ENST00000544778 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.7
BPTF-208ENST00000544778 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
BPTF-208ENST00000544778 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
BPTF-208ENST00000544778 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
BPTF-208ENST00000544778 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
BPTF-208ENST00000544778 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
BPTF-208ENST00000544778 KMT2DO14686 5537 aa3.93□□□□□ -1.78
BPTF-208ENST00000544778 NEBP20929 6669 aa3.92□□□□□ -1.78
BPTF-208ENST00000544778 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
BPTF-208ENST00000544778 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
BPTF-208ENST00000544778 USH2AO75445 5202 aa3.74□□□□□ -1.81
BPTF-208ENST00000544778 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
BPTF-208ENST00000544778 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
BPTF-208ENST00000544778 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
BPTF-208ENST00000544778 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
BPTF-208ENST00000544778 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
BPTF-208ENST00000544778 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
BPTF-208ENST00000544778 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
BPTF-208ENST00000544778 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
BPTF-208ENST00000544778 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
BPTF-208ENST00000544778 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
BPTF-208ENST00000544778 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
BPTF-208ENST00000544778 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
BPTF-208ENST00000544778 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
BPTF-208ENST00000544778 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
BPTF-208ENST00000544778 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
BPTF-208ENST00000544778 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
BPTF-208ENST00000544778 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
BPTF-208ENST00000544778 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
BPTF-208ENST00000544778 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
BPTF-208ENST00000544778 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
BPTF-208ENST00000544778 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
BPTF-208ENST00000544778 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
BPTF-208ENST00000544778 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 122.8 ms