RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
COPS7A-220ENST00000544725 K7ERU9 68 aa4.7□□□□□ -1.66
COPS7A-220ENST00000544725 SMIM20Q8N5G0 67 aa4.7□□□□□ -1.66
COPS7A-220ENST00000544725 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
COPS7A-220ENST00000544725 A0A1B0GU33 70 aa4.69□□□□□ -1.66
COPS7A-220ENST00000544725 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
COPS7A-220ENST00000544725 J3QR89 54 aa4.67□□□□□ -1.66
COPS7A-220ENST00000544725 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
COPS7A-220ENST00000544725 SNURFQ9Y675 71 aa4.66□□□□□ -1.66
COPS7A-220ENST00000544725 PCP4P48539 62 aa4.65□□□□□ -1.67
COPS7A-220ENST00000544725 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
COPS7A-220ENST00000544725 COA5Q86WW8 74 aa4.59□□□□□ -1.67
COPS7A-220ENST00000544725 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
COPS7A-220ENST00000544725 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
COPS7A-220ENST00000544725 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
COPS7A-220ENST00000544725 A8MU10 97 aa4.5□□□□□ -1.69
COPS7A-220ENST00000544725 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
COPS7A-220ENST00000544725 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
COPS7A-220ENST00000544725 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
COPS7A-220ENST00000544725 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
COPS7A-220ENST00000544725 A0A1B0GU69 56 aa4.39□□□□□ -1.71
COPS7A-220ENST00000544725 MT1AP04731 61 aa4.36□□□□□ -1.71
COPS7A-220ENST00000544725 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
COPS7A-220ENST00000544725 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
COPS7A-220ENST00000544725 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
COPS7A-220ENST00000544725 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
COPS7A-220ENST00000544725 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
COPS7A-220ENST00000544725 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
COPS7A-220ENST00000544725 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
COPS7A-220ENST00000544725 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
COPS7A-220ENST00000544725 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
COPS7A-220ENST00000544725 COX7CP15954 63 aa4.13□□□□□ -1.75
COPS7A-220ENST00000544725 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
COPS7A-220ENST00000544725 TMEM258P61165 79 aa4.12□□□□□ -1.75
COPS7A-220ENST00000544725 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
COPS7A-220ENST00000544725 H7BZZ5 65 aa4.11□□□□□ -1.75
COPS7A-220ENST00000544725 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
COPS7A-220ENST00000544725 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
COPS7A-220ENST00000544725 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
COPS7A-220ENST00000544725 MT3P25713 68 aa4.03□□□□□ -1.76
COPS7A-220ENST00000544725 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
COPS7A-220ENST00000544725 UQCR11O14957 56 aa3.96□□□□□ -1.78
COPS7A-220ENST00000544725 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
COPS7A-220ENST00000544725 K7ERS5 55 aa3.88□□□□□ -1.79
COPS7A-220ENST00000544725 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
COPS7A-220ENST00000544725 V9GYY9 64 aa3.85□□□□□ -1.79
COPS7A-220ENST00000544725 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
COPS7A-220ENST00000544725 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
COPS7A-220ENST00000544725 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
COPS7A-220ENST00000544725 Q1T7F1 81 aa3.74□□□□□ -1.81
COPS7A-220ENST00000544725 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
COPS7A-220ENST00000544725 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
COPS7A-220ENST00000544725 PSPHP1O15172 72 aa3.61□□□□□ -1.83
COPS7A-220ENST00000544725 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
COPS7A-220ENST00000544725 A6NED7 52 aa3.59□□□□□ -1.83
COPS7A-220ENST00000544725 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
COPS7A-220ENST00000544725 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
COPS7A-220ENST00000544725 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
COPS7A-220ENST00000544725 ROMO1P60602 79 aa3.48□□□□□ -1.85
COPS7A-220ENST00000544725 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
COPS7A-220ENST00000544725 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
COPS7A-220ENST00000544725 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
COPS7A-220ENST00000544725 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
COPS7A-220ENST00000544725 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
COPS7A-220ENST00000544725 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
COPS7A-220ENST00000544725 H3BS24 57 aa2.97□□□□□ -1.93
COPS7A-220ENST00000544725 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
COPS7A-220ENST00000544725 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
COPS7A-220ENST00000544725 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
COPS7A-220ENST00000544725 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
COPS7A-220ENST00000544725 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
COPS7A-220ENST00000544725 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
COPS7A-220ENST00000544725 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
COPS7A-220ENST00000544725 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
COPS7A-220ENST00000544725 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
COPS7A-220ENST00000544725 INE1O15225 51 aa2.43□□□□□ -2.02
COPS7A-220ENST00000544725 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
COPS7A-220ENST00000544725 PRM1P04553 51 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 27.8 ms