RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SPRR2DP22532 72 aa3.8□□□□□ -1.8
YBX3-215ENST00000544504 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
YBX3-215ENST00000544504 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
YBX3-215ENST00000544504 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
YBX3-215ENST00000544504 H3BS24 57 aa3.73□□□□□ -1.81
YBX3-215ENST00000544504 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
YBX3-215ENST00000544504 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
YBX3-215ENST00000544504 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
YBX3-215ENST00000544504 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
YBX3-215ENST00000544504 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
YBX3-215ENST00000544504 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
YBX3-215ENST00000544504 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
YBX3-215ENST00000544504 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
YBX3-215ENST00000544504 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
YBX3-215ENST00000544504 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
YBX3-215ENST00000544504 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
YBX3-215ENST00000544504 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
YBX3-215ENST00000544504 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
YBX3-215ENST00000544504 PRAC1Q96KF2 57 aa3.56□□□□□ -1.84
YBX3-215ENST00000544504 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
YBX3-215ENST00000544504 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
YBX3-215ENST00000544504 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
YBX3-215ENST00000544504 MT1EP04732 61 aa3.47□□□□□ -1.85
YBX3-215ENST00000544504 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
YBX3-215ENST00000544504 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
YBX3-215ENST00000544504 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
YBX3-215ENST00000544504 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
YBX3-215ENST00000544504 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
YBX3-215ENST00000544504 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
YBX3-215ENST00000544504 MT1LQ93083 61 aa3.38□□□□□ -1.87
YBX3-215ENST00000544504 MT1GP13640 62 aa3.37□□□□□ -1.87
YBX3-215ENST00000544504 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
YBX3-215ENST00000544504 MT4P47944 62 aa3.35□□□□□ -1.87
YBX3-215ENST00000544504 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
YBX3-215ENST00000544504 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
YBX3-215ENST00000544504 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
YBX3-215ENST00000544504 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
YBX3-215ENST00000544504 MT1MQ8N339 61 aa3.28□□□□□ -1.88
YBX3-215ENST00000544504 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
YBX3-215ENST00000544504 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
YBX3-215ENST00000544504 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
YBX3-215ENST00000544504 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
YBX3-215ENST00000544504 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
YBX3-215ENST00000544504 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
YBX3-215ENST00000544504 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
YBX3-215ENST00000544504 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
YBX3-215ENST00000544504 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
YBX3-215ENST00000544504 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
YBX3-215ENST00000544504 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
YBX3-215ENST00000544504 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
YBX3-215ENST00000544504 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
YBX3-215ENST00000544504 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
YBX3-215ENST00000544504 MT1AP04731 61 aa2.91□□□□□ -1.94
YBX3-215ENST00000544504 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
YBX3-215ENST00000544504 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
YBX3-215ENST00000544504 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
YBX3-215ENST00000544504 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
YBX3-215ENST00000544504 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
YBX3-215ENST00000544504 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
YBX3-215ENST00000544504 MT3P25713 68 aa2.66□□□□□ -1.98
YBX3-215ENST00000544504 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
YBX3-215ENST00000544504 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
YBX3-215ENST00000544504 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
YBX3-215ENST00000544504 INE1O15225 51 aa2.39□□□□□ -2.03
YBX3-215ENST00000544504 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
YBX3-215ENST00000544504 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
YBX3-215ENST00000544504 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
YBX3-215ENST00000544504 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
YBX3-215ENST00000544504 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
YBX3-215ENST00000544504 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
YBX3-215ENST00000544504 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
YBX3-215ENST00000544504 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
YBX3-215ENST00000544504 PRM1P04553 51 aa1.98□□□□□ -2.09
YBX3-215ENST00000544504 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
YBX3-215ENST00000544504 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
YBX3-215ENST00000544504 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
YBX3-215ENST00000544504 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
YBX3-215ENST00000544504 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 88.7 ms