RNA–Protein interactions for RNA: ENST00000544361.1

QKI-213, Transcript of QKI, KH domain containing RNA binding, human

TSL 5

Gene QKI, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
QKI-213	ENST00000544361	FAT3	Q8TDW7	4589 aa		1.57	□□□□□ -2.16
QKI-213	ENST00000544361	HSPG2	P98160	4391 aa		1.57	□□□□□ -2.16
QKI-213	ENST00000544361	TNXB	P22105	4242 aa		1.56	□□□□□ -2.16
QKI-213	ENST00000544361	KRTAP4-1	Q9BYQ7	146 aa		1.56	□□□□□ -2.16
QKI-213	ENST00000544361	EPPK1	P58107	5090 aa	Known RBP	1.53	□□□□□ -2.16
QKI-213	ENST00000544361	LRP1	Q07954	4544 aa	Known RBP	1.52	□□□□□ -2.17
QKI-213	ENST00000544361	MT1HL1	P0DM35	61 aa		1.52	□□□□□ -2.17
QKI-213	ENST00000544361	KIAA1109	Q2LD37	5005 aa		1.51	□□□□□ -2.17
QKI-213	ENST00000544361	BIRC6	Q9NR09	4857 aa		1.5	□□□□□ -2.17
QKI-213	ENST00000544361	MYCBP2	O75592	4640 aa		1.49	□□□□□ -2.17
QKI-213	ENST00000544361	HERC2	O95714	4834 aa		1.47	□□□□□ -2.17
QKI-213	ENST00000544361	ABCA13	Q86UQ4	5058 aa		1.47	□□□□□ -2.17
QKI-213	ENST00000544361	MUC17	Q685J3	4493 aa		1.46	□□□□□ -2.18
QKI-213	ENST00000544361	DMBT1	Q9UGM3	2413 aa	Predicted RBP	1.44	□□□□□ -2.18
QKI-213	ENST00000544361	LPA	P08519	4548 aa		1.42	□□□□□ -2.18
QKI-213	ENST00000544361	LRP2	P98164	4655 aa		1.41	□□□□□ -2.18
QKI-213	ENST00000544361	PCLO	Q9Y6V0	5065 aa		1.41	□□□□□ -2.18
QKI-213	ENST00000544361	UBR4	Q5T4S7	5183 aa		1.41	□□□□□ -2.18
QKI-213	ENST00000544361	HERC1	Q15751	4861 aa		1.4	□□□□□ -2.19
QKI-213	ENST00000544361	HMCN2	Q8NDA2	5059 aa		1.38	□□□□□ -2.19
QKI-213	ENST00000544361	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	1.37	□□□□□ -2.19
QKI-213	ENST00000544361	FLG	P20930	4061 aa	Predicted RBP	1.35	□□□□□ -2.19
QKI-213	ENST00000544361	KRTAP8-1	Q8IUC2	63 aa		1.34	□□□□□ -2.19
QKI-213	ENST00000544361	KRTAP19-2	Q3LHN2	52 aa		1.33	□□□□□ -2.2
QKI-213	ENST00000544361	RNF213	Q63HN8	5207 aa		1.33	□□□□□ -2.2
QKI-213	ENST00000544361		M0R2T5	61 aa		1.32	□□□□□ -2.2
QKI-213	ENST00000544361	MUC2	Q02817	5179 aa		1.3	□□□□□ -2.2
QKI-213	ENST00000544361	MT1H	P80294	61 aa		1.28	□□□□□ -2.2
QKI-213	ENST00000544361	FAT4	Q6V0I7	4981 aa		1.27	□□□□□ -2.21
QKI-213	ENST00000544361	SPRR2G	Q9BYE4	73 aa		1.27	□□□□□ -2.21
QKI-213	ENST00000544361	MT2A	P02795	61 aa		1.24	□□□□□ -2.21
QKI-213	ENST00000544361	MT1F	P04733	61 aa		1.23	□□□□□ -2.21
QKI-213	ENST00000544361	KRTAP2-3	P0C7H8	128 aa		1.2	□□□□□ -2.22
QKI-213	ENST00000544361	KRTAP19-8	Q3LI54	63 aa		1.2	□□□□□ -2.22
QKI-213	ENST00000544361	KRTAP2-4	Q9BYR9	128 aa		1.2	□□□□□ -2.22
QKI-213	ENST00000544361	KRTAP2-1	Q9BYU5	128 aa		1.2	□□□□□ -2.22
QKI-213	ENST00000544361	MT1B	P07438	61 aa		1.18	□□□□□ -2.22
QKI-213	ENST00000544361	MT1X	P80297	61 aa		1.15	□□□□□ -2.23
QKI-213	ENST00000544361	USH2A	O75445	5202 aa		1.12	□□□□□ -2.23
QKI-213	ENST00000544361	MT1E	P04732	61 aa		1.1	□□□□□ -2.23
QKI-213	ENST00000544361	FSIP2	Q5CZC0	6907 aa		1.09	□□□□□ -2.23
QKI-213	ENST00000544361	MT1A	P04731	61 aa		1.08	□□□□□ -2.24
QKI-213	ENST00000544361	MT1L	Q93083	61 aa		1.08	□□□□□ -2.24
QKI-213	ENST00000544361	SSPO	A2VEC9	5147 aa		1.07	□□□□□ -2.24
QKI-213	ENST00000544361	KRTAP19-6	Q3LI70	58 aa		1.07	□□□□□ -2.24
QKI-213	ENST00000544361	KRTAP19-5	Q3LI72	72 aa		1.07	□□□□□ -2.24
QKI-213	ENST00000544361	KRTAP20-1	Q3LI63	56 aa		1.06	□□□□□ -2.24
QKI-213	ENST00000544361	KMT2D	O14686	5537 aa		1.04	□□□□□ -2.24
QKI-213	ENST00000544361	KRTAP19-7	Q3SYF9	63 aa		1.02	□□□□□ -2.25
QKI-213	ENST00000544361	GPR98	Q8WXG9	6306 aa		1	□□□□□ -2.25
QKI-213	ENST00000544361	MT1G	P13640	62 aa		0.98	□□□□□ -2.25
QKI-213	ENST00000544361	MACF1	Q9UPN3	7388 aa	Known RBP	0.97	□□□□□ -2.25
QKI-213	ENST00000544361	KRTAP5-10	Q6L8G5	202 aa		0.97	□□□□□ -2.25
QKI-213	ENST00000544361	KRTAP19-3	Q7Z4W3	81 aa		0.97	□□□□□ -2.25
QKI-213	ENST00000544361	SPRR2F	Q96RM1	72 aa		0.97	□□□□□ -2.25
QKI-213	ENST00000544361	NEB	P20929	6669 aa		0.96	□□□□□ -2.26
QKI-213	ENST00000544361	PRM1	P04553	51 aa		0.96	□□□□□ -2.26
QKI-213	ENST00000544361	SPRR2A	P35326	72 aa		0.96	□□□□□ -2.26
QKI-213	ENST00000544361	MT1M	Q8N339	61 aa		0.95	□□□□□ -2.26
QKI-213	ENST00000544361	SPRR2B	P35325	72 aa		0.94	□□□□□ -2.26
QKI-213	ENST00000544361	MUC12	Q9UKN1	5478 aa		0.94	□□□□□ -2.26
QKI-213	ENST00000544361	SYNE2	Q8WXH0	6885 aa	Known RBP	0.92	□□□□□ -2.26
QKI-213	ENST00000544361	MDN1	Q9NU22	5596 aa		0.91	□□□□□ -2.26
QKI-213	ENST00000544361	SPRR2E	P22531	72 aa		0.91	□□□□□ -2.26
QKI-213	ENST00000544361	AHNAK2	Q8IVF2	5795 aa		0.91	□□□□□ -2.26
QKI-213	ENST00000544361	MUC16	Q8WXI7	14507 aa		0.89	□□□□□ -2.27
QKI-213	ENST00000544361	SPRR2D	P22532	72 aa		0.88	□□□□□ -2.27
QKI-213	ENST00000544361	KRTAP6-2	Q3LI66	62 aa		0.86	□□□□□ -2.27
QKI-213	ENST00000544361	DST	Q03001	7570 aa	Known RBP	0.84	□□□□□ -2.27
QKI-213	ENST00000544361	KRTAP6-1	Q3LI64	71 aa		0.84	□□□□□ -2.27
QKI-213	ENST00000544361	AHNAK	Q09666	5890 aa	Known RBP	0.81	□□□□□ -2.28
QKI-213	ENST00000544361	SYNE1	Q8NF91	8797 aa	Known RBP	0.79	□□□□□ -2.28
QKI-213	ENST00000544361	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.76	□□□□□ -2.29
QKI-213	ENST00000544361	MT4	P47944	62 aa		0.75	□□□□□ -2.29
QKI-213	ENST00000544361	KRTAP20-2	Q3LI61	65 aa		0.74	□□□□□ -2.29
QKI-213	ENST00000544361	MUC5AC	P98088	5654 aa		0.72	□□□□□ -2.29
QKI-213	ENST00000544361	KRTAP21-1	Q3LI58	79 aa		0.67	□□□□□ -2.3
QKI-213	ENST00000544361	PHGR1	C9JFL3	82 aa		0.52	□□□□□ -2.33

Retrieved 78 of 20,778 RNA–protein pairs in 1862.4 ms