RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
CDKN3-207ENST00000543789 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
CDKN3-207ENST00000543789 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
CDKN3-207ENST00000543789 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
CDKN3-207ENST00000543789 TMEM258P61165 79 aa7.73□□□□□ -1.17
CDKN3-207ENST00000543789 KRTAP5-7Q6L8G8 165 aa7.73□□□□□ -1.17
CDKN3-207ENST00000543789 KRTAP5-3Q6L8H2 238 aa7.69□□□□□ -1.18
CDKN3-207ENST00000543789 A8MU10 97 aa7.66□□□□□ -1.18
CDKN3-207ENST00000543789 TNP1P09430 55 aa7.66□□□□□ -1.18
CDKN3-207ENST00000543789 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
CDKN3-207ENST00000543789 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
CDKN3-207ENST00000543789 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
CDKN3-207ENST00000543789 SPRR5A0A1B0GTR4 108 aa7.48□□□□□ -1.21
CDKN3-207ENST00000543789 UQCR11O14957 56 aa7.47□□□□□ -1.21
CDKN3-207ENST00000543789 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
CDKN3-207ENST00000543789 KRTAP5-5Q701N2 237 aaPredicted RBP7.44□□□□□ -1.22
CDKN3-207ENST00000543789 KRTAP12-4P60329 112 aa7.41□□□□□ -1.22
CDKN3-207ENST00000543789 V9GYY9 64 aa7.32□□□□□ -1.24
CDKN3-207ENST00000543789 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
CDKN3-207ENST00000543789 PSPHP1O15172 72 aa7.25□□□□□ -1.25
CDKN3-207ENST00000543789 Q1T7F1 81 aa7.24□□□□□ -1.25
CDKN3-207ENST00000543789 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
CDKN3-207ENST00000543789 SYNE1Q8NF91 8797 aaKnown RBP7.21□□□□□ -1.26
CDKN3-207ENST00000543789 K7ERS5 55 aa7.19□□□□□ -1.26
CDKN3-207ENST00000543789 PCP4P48539 62 aa7.05□□□□□ -1.28
CDKN3-207ENST00000543789 A6NED7 52 aa7.04□□□□□ -1.28
CDKN3-207ENST00000543789 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
CDKN3-207ENST00000543789 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
CDKN3-207ENST00000543789 KRTAP4-11Q9BYQ6 195 aa7.03□□□□□ -1.28
CDKN3-207ENST00000543789 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
CDKN3-207ENST00000543789 KRTAP5-2Q701N4 177 aa6.9□□□□□ -1.3
CDKN3-207ENST00000543789 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
CDKN3-207ENST00000543789 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
CDKN3-207ENST00000543789 KRTAP5-8O75690 187 aa6.79□□□□□ -1.32
CDKN3-207ENST00000543789 MT1AP04731 61 aa6.79□□□□□ -1.32
CDKN3-207ENST00000543789 KRTAP6-1Q3LI64 71 aa6.79□□□□□ -1.32
CDKN3-207ENST00000543789 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
CDKN3-207ENST00000543789 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
CDKN3-207ENST00000543789 ROMO1P60602 79 aa6.68□□□□□ -1.34
CDKN3-207ENST00000543789 MUC5ACP98088 5654 aa6.66□□□□□ -1.34
CDKN3-207ENST00000543789 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
CDKN3-207ENST00000543789 AHNAKQ09666 5890 aaKnown RBP6.64□□□□□ -1.35
CDKN3-207ENST00000543789 MUC5BQ9HC84 5762 aaPredicted RBP6.62□□□□□ -1.35
CDKN3-207ENST00000543789 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
CDKN3-207ENST00000543789 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
CDKN3-207ENST00000543789 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
CDKN3-207ENST00000543789 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
CDKN3-207ENST00000543789 KRTAP5-1Q6L8H4 278 aa6.28□□□□□ -1.4
CDKN3-207ENST00000543789 MT3P25713 68 aa6.26□□□□□ -1.41
CDKN3-207ENST00000543789 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
CDKN3-207ENST00000543789 LCE1EQ5T753 118 aa5.86□□□□□ -1.47
CDKN3-207ENST00000543789 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
CDKN3-207ENST00000543789 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
CDKN3-207ENST00000543789 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
CDKN3-207ENST00000543789 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
CDKN3-207ENST00000543789 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
CDKN3-207ENST00000543789 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
CDKN3-207ENST00000543789 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
CDKN3-207ENST00000543789 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CDKN3-207ENST00000543789 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
CDKN3-207ENST00000543789 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
CDKN3-207ENST00000543789 KRTAP5-11Q6L8G4 156 aa4.95□□□□□ -1.62
CDKN3-207ENST00000543789 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
CDKN3-207ENST00000543789 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
CDKN3-207ENST00000543789 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
CDKN3-207ENST00000543789 PHGR1C9JFL3 82 aa4.68□□□□□ -1.66
CDKN3-207ENST00000543789 KRTAP21-2Q3LI59 83 aa4.47□□□□□ -1.69
CDKN3-207ENST00000543789 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
CDKN3-207ENST00000543789 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
CDKN3-207ENST00000543789 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
CDKN3-207ENST00000543789 H3BS24 57 aa4.03□□□□□ -1.76
CDKN3-207ENST00000543789 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
CDKN3-207ENST00000543789 KRTAP21-1Q3LI58 79 aa3.57□□□□□ -1.84
CDKN3-207ENST00000543789 PRM1P04553 51 aa3.42□□□□□ -1.86
CDKN3-207ENST00000543789 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
CDKN3-207ENST00000543789 INE1O15225 51 aa3.14□□□□□ -1.91
CDKN3-207ENST00000543789 MUC16Q8WXI7 14507 aa2.89□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms