RNA–Protein interactions for RNA: ENST00000543540.5

CADM1-216, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 629 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-216ENST00000543540 PSPHP1O15172 72 aa4.16□□□□□ -1.74
CADM1-216ENST00000543540 Q1T7F1 81 aa4.16□□□□□ -1.74
CADM1-216ENST00000543540 MT1GP13640 62 aa4.15□□□□□ -1.75
CADM1-216ENST00000543540 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
CADM1-216ENST00000543540 V9GYY9 64 aa4.15□□□□□ -1.75
CADM1-216ENST00000543540 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
CADM1-216ENST00000543540 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CADM1-216ENST00000543540 TNP1P09430 55 aa4.12□□□□□ -1.75
CADM1-216ENST00000543540 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CADM1-216ENST00000543540 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
CADM1-216ENST00000543540 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
CADM1-216ENST00000543540 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
CADM1-216ENST00000543540 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
CADM1-216ENST00000543540 MT1MQ8N339 61 aa4.07□□□□□ -1.76
CADM1-216ENST00000543540 MT1LQ93083 61 aa4.05□□□□□ -1.76
CADM1-216ENST00000543540 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
CADM1-216ENST00000543540 MT4P47944 62 aa4.02□□□□□ -1.77
CADM1-216ENST00000543540 A6NED7 52 aa4□□□□□ -1.77
CADM1-216ENST00000543540 K7ERS5 55 aa4□□□□□ -1.77
CADM1-216ENST00000543540 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
CADM1-216ENST00000543540 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
CADM1-216ENST00000543540 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CADM1-216ENST00000543540 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
CADM1-216ENST00000543540 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
CADM1-216ENST00000543540 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
CADM1-216ENST00000543540 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
CADM1-216ENST00000543540 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
CADM1-216ENST00000543540 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CADM1-216ENST00000543540 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
CADM1-216ENST00000543540 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
CADM1-216ENST00000543540 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
CADM1-216ENST00000543540 ROMO1P60602 79 aa3.8□□□□□ -1.8
CADM1-216ENST00000543540 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CADM1-216ENST00000543540 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
CADM1-216ENST00000543540 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
CADM1-216ENST00000543540 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
CADM1-216ENST00000543540 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
CADM1-216ENST00000543540 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CADM1-216ENST00000543540 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
CADM1-216ENST00000543540 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
CADM1-216ENST00000543540 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
CADM1-216ENST00000543540 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
CADM1-216ENST00000543540 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
CADM1-216ENST00000543540 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CADM1-216ENST00000543540 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CADM1-216ENST00000543540 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
CADM1-216ENST00000543540 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CADM1-216ENST00000543540 MT1AP04731 61 aa3.45□□□□□ -1.86
CADM1-216ENST00000543540 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
CADM1-216ENST00000543540 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CADM1-216ENST00000543540 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CADM1-216ENST00000543540 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
CADM1-216ENST00000543540 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
CADM1-216ENST00000543540 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
CADM1-216ENST00000543540 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
CADM1-216ENST00000543540 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
CADM1-216ENST00000543540 MT3P25713 68 aa3.16□□□□□ -1.9
CADM1-216ENST00000543540 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CADM1-216ENST00000543540 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
CADM1-216ENST00000543540 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CADM1-216ENST00000543540 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CADM1-216ENST00000543540 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CADM1-216ENST00000543540 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CADM1-216ENST00000543540 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
CADM1-216ENST00000543540 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
CADM1-216ENST00000543540 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
CADM1-216ENST00000543540 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
CADM1-216ENST00000543540 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
CADM1-216ENST00000543540 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
CADM1-216ENST00000543540 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
CADM1-216ENST00000543540 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
CADM1-216ENST00000543540 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CADM1-216ENST00000543540 INE1O15225 51 aa2.13□□□□□ -2.07
CADM1-216ENST00000543540 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
CADM1-216ENST00000543540 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CADM1-216ENST00000543540 PRM1P04553 51 aa1.96□□□□□ -2.1
CADM1-216ENST00000543540 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
CADM1-216ENST00000543540 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms