RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 MT4P47944 62 aa5.61□□□□□ -1.51
CSF1R-209ENST00000543093 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
CSF1R-209ENST00000543093 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
CSF1R-209ENST00000543093 TNP1P09430 55 aa5.58□□□□□ -1.52
CSF1R-209ENST00000543093 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
CSF1R-209ENST00000543093 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
CSF1R-209ENST00000543093 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
CSF1R-209ENST00000543093 MT1MQ8N339 61 aa5.53□□□□□ -1.52
CSF1R-209ENST00000543093 HMCN1Q96RW7 5635 aa5.52□□□□□ -1.53
CSF1R-209ENST00000543093 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
CSF1R-209ENST00000543093 K7ERS5 55 aa5.48□□□□□ -1.53
CSF1R-209ENST00000543093 MT1LQ93083 61 aa5.48□□□□□ -1.53
CSF1R-209ENST00000543093 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
CSF1R-209ENST00000543093 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
CSF1R-209ENST00000543093 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
CSF1R-209ENST00000543093 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
CSF1R-209ENST00000543093 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
CSF1R-209ENST00000543093 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
CSF1R-209ENST00000543093 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
CSF1R-209ENST00000543093 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
CSF1R-209ENST00000543093 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
CSF1R-209ENST00000543093 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
CSF1R-209ENST00000543093 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
CSF1R-209ENST00000543093 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
CSF1R-209ENST00000543093 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
CSF1R-209ENST00000543093 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
CSF1R-209ENST00000543093 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CSF1R-209ENST00000543093 ROMO1P60602 79 aa5.11□□□□□ -1.59
CSF1R-209ENST00000543093 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
CSF1R-209ENST00000543093 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
CSF1R-209ENST00000543093 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
CSF1R-209ENST00000543093 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
CSF1R-209ENST00000543093 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
CSF1R-209ENST00000543093 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
CSF1R-209ENST00000543093 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
CSF1R-209ENST00000543093 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
CSF1R-209ENST00000543093 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
CSF1R-209ENST00000543093 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
CSF1R-209ENST00000543093 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
CSF1R-209ENST00000543093 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
CSF1R-209ENST00000543093 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CSF1R-209ENST00000543093 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
CSF1R-209ENST00000543093 MT1AP04731 61 aa4.65□□□□□ -1.67
CSF1R-209ENST00000543093 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
CSF1R-209ENST00000543093 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
CSF1R-209ENST00000543093 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
CSF1R-209ENST00000543093 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
CSF1R-209ENST00000543093 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
CSF1R-209ENST00000543093 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
CSF1R-209ENST00000543093 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
CSF1R-209ENST00000543093 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
CSF1R-209ENST00000543093 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
CSF1R-209ENST00000543093 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
CSF1R-209ENST00000543093 H3BS24 57 aa4.35□□□□□ -1.71
CSF1R-209ENST00000543093 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
CSF1R-209ENST00000543093 MT3P25713 68 aa4.27□□□□□ -1.73
CSF1R-209ENST00000543093 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
CSF1R-209ENST00000543093 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CSF1R-209ENST00000543093 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
CSF1R-209ENST00000543093 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CSF1R-209ENST00000543093 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
CSF1R-209ENST00000543093 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
CSF1R-209ENST00000543093 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CSF1R-209ENST00000543093 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
CSF1R-209ENST00000543093 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
CSF1R-209ENST00000543093 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
CSF1R-209ENST00000543093 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CSF1R-209ENST00000543093 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
CSF1R-209ENST00000543093 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CSF1R-209ENST00000543093 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
CSF1R-209ENST00000543093 INE1O15225 51 aa3.14□□□□□ -1.91
CSF1R-209ENST00000543093 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
CSF1R-209ENST00000543093 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CSF1R-209ENST00000543093 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CSF1R-209ENST00000543093 PRM1P04553 51 aa2.63□□□□□ -1.99
CSF1R-209ENST00000543093 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CSF1R-209ENST00000543093 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms