RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-208ENST00000542602 PSPHP1O15172 72 aa6.75□□□□□ -1.33
PSMD9-208ENST00000542602 MT1LQ93083 61 aa6.75□□□□□ -1.33
PSMD9-208ENST00000542602 MT1MQ8N339 61 aa6.7□□□□□ -1.34
PSMD9-208ENST00000542602 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
PSMD9-208ENST00000542602 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
PSMD9-208ENST00000542602 A6NED7 52 aa6.56□□□□□ -1.36
PSMD9-208ENST00000542602 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
PSMD9-208ENST00000542602 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
PSMD9-208ENST00000542602 KRTAP4-3Q9BYR4 195 aa6.49□□□□□ -1.37
PSMD9-208ENST00000542602 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
PSMD9-208ENST00000542602 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
PSMD9-208ENST00000542602 PCP4P48539 62 aa6.46□□□□□ -1.38
PSMD9-208ENST00000542602 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
PSMD9-208ENST00000542602 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
PSMD9-208ENST00000542602 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
PSMD9-208ENST00000542602 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
PSMD9-208ENST00000542602 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
PSMD9-208ENST00000542602 GPR98Q8WXG9 6306 aa6.34□□□□□ -1.39
PSMD9-208ENST00000542602 HMCN1Q96RW7 5635 aa6.33□□□□□ -1.4
PSMD9-208ENST00000542602 MT4P47944 62 aa6.32□□□□□ -1.4
PSMD9-208ENST00000542602 ROMO1P60602 79 aa6.28□□□□□ -1.4
PSMD9-208ENST00000542602 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
PSMD9-208ENST00000542602 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
PSMD9-208ENST00000542602 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
PSMD9-208ENST00000542602 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
PSMD9-208ENST00000542602 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
PSMD9-208ENST00000542602 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
PSMD9-208ENST00000542602 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
PSMD9-208ENST00000542602 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
PSMD9-208ENST00000542602 H3BS24 57 aa5.96□□□□□ -1.46
PSMD9-208ENST00000542602 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
PSMD9-208ENST00000542602 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
PSMD9-208ENST00000542602 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
PSMD9-208ENST00000542602 KRTAP5-10Q6L8G5 202 aa5.88□□□□□ -1.47
PSMD9-208ENST00000542602 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
PSMD9-208ENST00000542602 MT1AP04731 61 aa5.76□□□□□ -1.49
PSMD9-208ENST00000542602 KRTAP9-6A8MVA2 160 aa5.7□□□□□ -1.5
PSMD9-208ENST00000542602 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
PSMD9-208ENST00000542602 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
PSMD9-208ENST00000542602 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
PSMD9-208ENST00000542602 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
PSMD9-208ENST00000542602 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
PSMD9-208ENST00000542602 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
PSMD9-208ENST00000542602 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
PSMD9-208ENST00000542602 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
PSMD9-208ENST00000542602 MT3P25713 68 aa5.31□□□□□ -1.56
PSMD9-208ENST00000542602 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
PSMD9-208ENST00000542602 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
PSMD9-208ENST00000542602 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
PSMD9-208ENST00000542602 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
PSMD9-208ENST00000542602 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
PSMD9-208ENST00000542602 MUC5BQ9HC84 5762 aaPredicted RBP5□□□□□ -1.61
PSMD9-208ENST00000542602 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
PSMD9-208ENST00000542602 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
PSMD9-208ENST00000542602 MUC5ACP98088 5654 aa4.93□□□□□ -1.62
PSMD9-208ENST00000542602 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
PSMD9-208ENST00000542602 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
PSMD9-208ENST00000542602 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
PSMD9-208ENST00000542602 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
PSMD9-208ENST00000542602 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
PSMD9-208ENST00000542602 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
PSMD9-208ENST00000542602 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
PSMD9-208ENST00000542602 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
PSMD9-208ENST00000542602 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
PSMD9-208ENST00000542602 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
PSMD9-208ENST00000542602 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
PSMD9-208ENST00000542602 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
PSMD9-208ENST00000542602 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
PSMD9-208ENST00000542602 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
PSMD9-208ENST00000542602 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PSMD9-208ENST00000542602 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
PSMD9-208ENST00000542602 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PSMD9-208ENST00000542602 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
PSMD9-208ENST00000542602 PRM1P04553 51 aa3.17□□□□□ -1.9
PSMD9-208ENST00000542602 INE1O15225 51 aa2.91□□□□□ -1.94
PSMD9-208ENST00000542602 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
PSMD9-208ENST00000542602 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms