RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 MT1LQ93083 61 aa7.16□□□□□ -1.26
CACNA2D4-215ENST00000542340 K7ERS5 55 aa7.15□□□□□ -1.26
CACNA2D4-215ENST00000542340 DSTQ03001 7570 aaKnown RBP7.14□□□□□ -1.27
CACNA2D4-215ENST00000542340 MT1MQ8N339 61 aa7.09□□□□□ -1.27
CACNA2D4-215ENST00000542340 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
CACNA2D4-215ENST00000542340 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CACNA2D4-215ENST00000542340 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
CACNA2D4-215ENST00000542340 PCP4P48539 62 aa7.01□□□□□ -1.29
CACNA2D4-215ENST00000542340 A6NED7 52 aa7□□□□□ -1.29
CACNA2D4-215ENST00000542340 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.3
CACNA2D4-215ENST00000542340 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
CACNA2D4-215ENST00000542340 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
CACNA2D4-215ENST00000542340 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
CACNA2D4-215ENST00000542340 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
CACNA2D4-215ENST00000542340 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
CACNA2D4-215ENST00000542340 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
CACNA2D4-215ENST00000542340 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
CACNA2D4-215ENST00000542340 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
CACNA2D4-215ENST00000542340 ROMO1P60602 79 aa6.68□□□□□ -1.34
CACNA2D4-215ENST00000542340 MT4P47944 62 aa6.65□□□□□ -1.34
CACNA2D4-215ENST00000542340 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
CACNA2D4-215ENST00000542340 HMCN1Q96RW7 5635 aa6.62□□□□□ -1.35
CACNA2D4-215ENST00000542340 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
CACNA2D4-215ENST00000542340 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
CACNA2D4-215ENST00000542340 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
CACNA2D4-215ENST00000542340 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
CACNA2D4-215ENST00000542340 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
CACNA2D4-215ENST00000542340 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
CACNA2D4-215ENST00000542340 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
CACNA2D4-215ENST00000542340 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
CACNA2D4-215ENST00000542340 AHNAK2Q8IVF2 5795 aa6.29□□□□□ -1.4
CACNA2D4-215ENST00000542340 KRTAP5-10Q6L8G5 202 aa6.18□□□□□ -1.42
CACNA2D4-215ENST00000542340 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
CACNA2D4-215ENST00000542340 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
CACNA2D4-215ENST00000542340 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
CACNA2D4-215ENST00000542340 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
CACNA2D4-215ENST00000542340 MT1AP04731 61 aa6.1□□□□□ -1.43
CACNA2D4-215ENST00000542340 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
CACNA2D4-215ENST00000542340 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
CACNA2D4-215ENST00000542340 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
CACNA2D4-215ENST00000542340 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
CACNA2D4-215ENST00000542340 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
CACNA2D4-215ENST00000542340 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
CACNA2D4-215ENST00000542340 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
CACNA2D4-215ENST00000542340 MT3P25713 68 aa5.59□□□□□ -1.51
CACNA2D4-215ENST00000542340 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
CACNA2D4-215ENST00000542340 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
CACNA2D4-215ENST00000542340 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.53
CACNA2D4-215ENST00000542340 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
CACNA2D4-215ENST00000542340 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
CACNA2D4-215ENST00000542340 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
CACNA2D4-215ENST00000542340 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
CACNA2D4-215ENST00000542340 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
CACNA2D4-215ENST00000542340 MUC5ACP98088 5654 aa5.15□□□□□ -1.59
CACNA2D4-215ENST00000542340 AHNAKQ09666 5890 aaKnown RBP5.13□□□□□ -1.59
CACNA2D4-215ENST00000542340 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
CACNA2D4-215ENST00000542340 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
CACNA2D4-215ENST00000542340 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
CACNA2D4-215ENST00000542340 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
CACNA2D4-215ENST00000542340 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
CACNA2D4-215ENST00000542340 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
CACNA2D4-215ENST00000542340 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
CACNA2D4-215ENST00000542340 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
CACNA2D4-215ENST00000542340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
CACNA2D4-215ENST00000542340 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CACNA2D4-215ENST00000542340 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
CACNA2D4-215ENST00000542340 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
CACNA2D4-215ENST00000542340 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
CACNA2D4-215ENST00000542340 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
CACNA2D4-215ENST00000542340 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
CACNA2D4-215ENST00000542340 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
CACNA2D4-215ENST00000542340 H3BS24 57 aa3.52□□□□□ -1.85
CACNA2D4-215ENST00000542340 PRM1P04553 51 aa3.41□□□□□ -1.86
CACNA2D4-215ENST00000542340 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
CACNA2D4-215ENST00000542340 INE1O15225 51 aa3.11□□□□□ -1.91
CACNA2D4-215ENST00000542340 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
CACNA2D4-215ENST00000542340 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
CACNA2D4-215ENST00000542340 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms