RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 F8W1H4 67 aa2.74□□□□□ -1.97
LRP6-204ENST00000540415 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
LRP6-204ENST00000540415 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
LRP6-204ENST00000540415 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
LRP6-204ENST00000540415 ATP5EP2Q5VTU8 51 aa2.73□□□□□ -1.97
LRP6-204ENST00000540415 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
LRP6-204ENST00000540415 DMAC1Q96GE9 116 aa2.72□□□□□ -1.97
LRP6-204ENST00000540415 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
LRP6-204ENST00000540415 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
LRP6-204ENST00000540415 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
LRP6-204ENST00000540415 J3QR89 54 aa2.71□□□□□ -1.98
LRP6-204ENST00000540415 K7ERS5 55 aa2.71□□□□□ -1.98
LRP6-204ENST00000540415 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
LRP6-204ENST00000540415 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
LRP6-204ENST00000540415 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
LRP6-204ENST00000540415 A6NED7 52 aa2.66□□□□□ -1.98
LRP6-204ENST00000540415 CHKB-CPT1BH3BT56 60 aa2.66□□□□□ -1.98
LRP6-204ENST00000540415 H3BPC8 53 aa2.65□□□□□ -1.99
LRP6-204ENST00000540415 SPANXA2-OT1Q8N9U9 137 aa2.65□□□□□ -1.99
LRP6-204ENST00000540415 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
LRP6-204ENST00000540415 ACYP2P14621 99 aa2.64□□□□□ -1.99
LRP6-204ENST00000540415 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
LRP6-204ENST00000540415 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
LRP6-204ENST00000540415 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
LRP6-204ENST00000540415 LINC00643Q86TS7 51 aa2.63□□□□□ -1.99
LRP6-204ENST00000540415 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
LRP6-204ENST00000540415 CCDC179H3BU77 68 aa2.6□□□□□ -1.99
LRP6-204ENST00000540415 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
LRP6-204ENST00000540415 TMEM258P61165 79 aa2.57□□□□□ -2
LRP6-204ENST00000540415 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
LRP6-204ENST00000540415 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
LRP6-204ENST00000540415 A0A1B0GU33 70 aa2.51□□□□□ -2.01
LRP6-204ENST00000540415 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
LRP6-204ENST00000540415 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
LRP6-204ENST00000540415 SPATA8Q6RVD6 105 aa2.49□□□□□ -2.01
LRP6-204ENST00000540415 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
LRP6-204ENST00000540415 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
LRP6-204ENST00000540415 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
LRP6-204ENST00000540415 ROMO1P60602 79 aa2.47□□□□□ -2.01
LRP6-204ENST00000540415 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
LRP6-204ENST00000540415 COX7CP15954 63 aa2.43□□□□□ -2.02
LRP6-204ENST00000540415 SNURFQ9Y675 71 aa2.43□□□□□ -2.02
LRP6-204ENST00000540415 TNP1P09430 55 aa2.42□□□□□ -2.02
LRP6-204ENST00000540415 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
LRP6-204ENST00000540415 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
LRP6-204ENST00000540415 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
LRP6-204ENST00000540415 MT1AP04731 61 aa2.36□□□□□ -2.03
LRP6-204ENST00000540415 COA5Q86WW8 74 aa2.36□□□□□ -2.03
LRP6-204ENST00000540415 A8MU10 97 aa2.34□□□□□ -2.03
LRP6-204ENST00000540415 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
LRP6-204ENST00000540415 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
LRP6-204ENST00000540415 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
LRP6-204ENST00000540415 A0A1B0GU69 56 aa2.31□□□□□ -2.04
LRP6-204ENST00000540415 H7BZZ5 65 aa2.31□□□□□ -2.04
LRP6-204ENST00000540415 MT3P25713 68 aa2.3□□□□□ -2.04
LRP6-204ENST00000540415 Q1T7F1 81 aa2.29□□□□□ -2.04
LRP6-204ENST00000540415 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
LRP6-204ENST00000540415 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
LRP6-204ENST00000540415 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
LRP6-204ENST00000540415 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
LRP6-204ENST00000540415 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
LRP6-204ENST00000540415 UQCR11O14957 56 aa2.1□□□□□ -2.07
LRP6-204ENST00000540415 LINC01558Q9Y6Z2 57 aa2.06□□□□□ -2.08
LRP6-204ENST00000540415 INE1O15225 51 aa2.04□□□□□ -2.08
LRP6-204ENST00000540415 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
LRP6-204ENST00000540415 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
LRP6-204ENST00000540415 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
LRP6-204ENST00000540415 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
LRP6-204ENST00000540415 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
LRP6-204ENST00000540415 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.11
LRP6-204ENST00000540415 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
LRP6-204ENST00000540415 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
LRP6-204ENST00000540415 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
LRP6-204ENST00000540415 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LRP6-204ENST00000540415 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
LRP6-204ENST00000540415 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
LRP6-204ENST00000540415 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
LRP6-204ENST00000540415 PRM1P04553 51 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms