RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
PRPF19-204ENST00000539960 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
PRPF19-204ENST00000539960 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
PRPF19-204ENST00000539960 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
PRPF19-204ENST00000539960 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
PRPF19-204ENST00000539960 MT1GP13640 62 aa4.83□□□□□ -1.64
PRPF19-204ENST00000539960 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
PRPF19-204ENST00000539960 MT1LQ93083 61 aa4.79□□□□□ -1.64
PRPF19-204ENST00000539960 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
PRPF19-204ENST00000539960 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
PRPF19-204ENST00000539960 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
PRPF19-204ENST00000539960 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
PRPF19-204ENST00000539960 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
PRPF19-204ENST00000539960 MT1MQ8N339 61 aa4.72□□□□□ -1.65
PRPF19-204ENST00000539960 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
PRPF19-204ENST00000539960 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
PRPF19-204ENST00000539960 ROMO1P60602 79 aa4.67□□□□□ -1.66
PRPF19-204ENST00000539960 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PRPF19-204ENST00000539960 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
PRPF19-204ENST00000539960 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
PRPF19-204ENST00000539960 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
PRPF19-204ENST00000539960 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
PRPF19-204ENST00000539960 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
PRPF19-204ENST00000539960 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
PRPF19-204ENST00000539960 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
PRPF19-204ENST00000539960 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
PRPF19-204ENST00000539960 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
PRPF19-204ENST00000539960 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
PRPF19-204ENST00000539960 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
PRPF19-204ENST00000539960 MT4P47944 62 aa4.35□□□□□ -1.71
PRPF19-204ENST00000539960 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
PRPF19-204ENST00000539960 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
PRPF19-204ENST00000539960 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
PRPF19-204ENST00000539960 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
PRPF19-204ENST00000539960 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
PRPF19-204ENST00000539960 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
PRPF19-204ENST00000539960 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
PRPF19-204ENST00000539960 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
PRPF19-204ENST00000539960 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
PRPF19-204ENST00000539960 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
PRPF19-204ENST00000539960 MT1AP04731 61 aa4.08□□□□□ -1.76
PRPF19-204ENST00000539960 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
PRPF19-204ENST00000539960 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
PRPF19-204ENST00000539960 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
PRPF19-204ENST00000539960 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
PRPF19-204ENST00000539960 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
PRPF19-204ENST00000539960 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
PRPF19-204ENST00000539960 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
PRPF19-204ENST00000539960 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
PRPF19-204ENST00000539960 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
PRPF19-204ENST00000539960 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
PRPF19-204ENST00000539960 MT3P25713 68 aa3.74□□□□□ -1.81
PRPF19-204ENST00000539960 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
PRPF19-204ENST00000539960 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
PRPF19-204ENST00000539960 H3BS24 57 aa3.55□□□□□ -1.84
PRPF19-204ENST00000539960 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
PRPF19-204ENST00000539960 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
PRPF19-204ENST00000539960 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
PRPF19-204ENST00000539960 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
PRPF19-204ENST00000539960 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PRPF19-204ENST00000539960 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
PRPF19-204ENST00000539960 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
PRPF19-204ENST00000539960 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
PRPF19-204ENST00000539960 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
PRPF19-204ENST00000539960 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
PRPF19-204ENST00000539960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
PRPF19-204ENST00000539960 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
PRPF19-204ENST00000539960 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PRPF19-204ENST00000539960 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
PRPF19-204ENST00000539960 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
PRPF19-204ENST00000539960 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
PRPF19-204ENST00000539960 INE1O15225 51 aa2.53□□□□□ -2
PRPF19-204ENST00000539960 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PRPF19-204ENST00000539960 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PRPF19-204ENST00000539960 PRM1P04553 51 aa2.39□□□□□ -2.03
PRPF19-204ENST00000539960 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
PRPF19-204ENST00000539960 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
PRPF19-204ENST00000539960 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 68.7 ms