RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 TNP1P09430 55 aa5.24□□□□□ -1.57
CCND1-204ENST00000539241 MT1EP04732 61 aa5.22□□□□□ -1.57
CCND1-204ENST00000539241 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
CCND1-204ENST00000539241 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
CCND1-204ENST00000539241 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
CCND1-204ENST00000539241 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
CCND1-204ENST00000539241 MT1GP13640 62 aa5.07□□□□□ -1.6
CCND1-204ENST00000539241 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
CCND1-204ENST00000539241 ROMO1P60602 79 aa5.05□□□□□ -1.6
CCND1-204ENST00000539241 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
CCND1-204ENST00000539241 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
CCND1-204ENST00000539241 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
CCND1-204ENST00000539241 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
CCND1-204ENST00000539241 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
CCND1-204ENST00000539241 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
CCND1-204ENST00000539241 MT1MQ8N339 61 aa4.98□□□□□ -1.61
CCND1-204ENST00000539241 MT4P47944 62 aa4.96□□□□□ -1.62
CCND1-204ENST00000539241 MT1LQ93083 61 aa4.96□□□□□ -1.62
CCND1-204ENST00000539241 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
CCND1-204ENST00000539241 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
CCND1-204ENST00000539241 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CCND1-204ENST00000539241 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
CCND1-204ENST00000539241 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
CCND1-204ENST00000539241 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
CCND1-204ENST00000539241 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
CCND1-204ENST00000539241 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
CCND1-204ENST00000539241 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
CCND1-204ENST00000539241 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
CCND1-204ENST00000539241 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
CCND1-204ENST00000539241 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
CCND1-204ENST00000539241 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CCND1-204ENST00000539241 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
CCND1-204ENST00000539241 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
CCND1-204ENST00000539241 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
CCND1-204ENST00000539241 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
CCND1-204ENST00000539241 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
CCND1-204ENST00000539241 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CCND1-204ENST00000539241 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
CCND1-204ENST00000539241 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
CCND1-204ENST00000539241 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
CCND1-204ENST00000539241 AHNAKQ09666 5890 aaKnown RBP4.29□□□□□ -1.72
CCND1-204ENST00000539241 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
CCND1-204ENST00000539241 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
CCND1-204ENST00000539241 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
CCND1-204ENST00000539241 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
CCND1-204ENST00000539241 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
CCND1-204ENST00000539241 MT1AP04731 61 aa4.21□□□□□ -1.74
CCND1-204ENST00000539241 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
CCND1-204ENST00000539241 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
CCND1-204ENST00000539241 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
CCND1-204ENST00000539241 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
CCND1-204ENST00000539241 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
CCND1-204ENST00000539241 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CCND1-204ENST00000539241 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
CCND1-204ENST00000539241 MT3P25713 68 aa3.87□□□□□ -1.79
CCND1-204ENST00000539241 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
CCND1-204ENST00000539241 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
CCND1-204ENST00000539241 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CCND1-204ENST00000539241 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
CCND1-204ENST00000539241 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
CCND1-204ENST00000539241 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
CCND1-204ENST00000539241 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
CCND1-204ENST00000539241 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CCND1-204ENST00000539241 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
CCND1-204ENST00000539241 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
CCND1-204ENST00000539241 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CCND1-204ENST00000539241 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
CCND1-204ENST00000539241 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CCND1-204ENST00000539241 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
CCND1-204ENST00000539241 H3BS24 57 aa2.91□□□□□ -1.94
CCND1-204ENST00000539241 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
CCND1-204ENST00000539241 INE1O15225 51 aa2.82□□□□□ -1.96
CCND1-204ENST00000539241 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CCND1-204ENST00000539241 PRM1P04553 51 aa2.59□□□□□ -1.99
CCND1-204ENST00000539241 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
CCND1-204ENST00000539241 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CCND1-204ENST00000539241 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
CCND1-204ENST00000539241 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms