RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MT1EP04732 61 aa5.24□□□□□ -1.57
SMARCA4-206ENST00000538456 A8MU10 97 aa5.23□□□□□ -1.57
SMARCA4-206ENST00000538456 MT4P47944 62 aa5.22□□□□□ -1.57
SMARCA4-206ENST00000538456 A0A0D9SG42 100 aa5.18□□□□□ -1.58
SMARCA4-206ENST00000538456 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
SMARCA4-206ENST00000538456 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
SMARCA4-206ENST00000538456 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
SMARCA4-206ENST00000538456 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
SMARCA4-206ENST00000538456 K7ERS5 55 aa5.12□□□□□ -1.59
SMARCA4-206ENST00000538456 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
SMARCA4-206ENST00000538456 MT1GP13640 62 aa5.08□□□□□ -1.6
SMARCA4-206ENST00000538456 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
SMARCA4-206ENST00000538456 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
SMARCA4-206ENST00000538456 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
SMARCA4-206ENST00000538456 MT1MQ8N339 61 aa5.02□□□□□ -1.61
SMARCA4-206ENST00000538456 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
SMARCA4-206ENST00000538456 PMAIP1Q13794 54 aa5□□□□□ -1.61
SMARCA4-206ENST00000538456 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
SMARCA4-206ENST00000538456 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SMARCA4-206ENST00000538456 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
SMARCA4-206ENST00000538456 MT1LQ93083 61 aa4.94□□□□□ -1.62
SMARCA4-206ENST00000538456 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
SMARCA4-206ENST00000538456 ROMO1P60602 79 aa4.89□□□□□ -1.63
SMARCA4-206ENST00000538456 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
SMARCA4-206ENST00000538456 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
SMARCA4-206ENST00000538456 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
SMARCA4-206ENST00000538456 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
SMARCA4-206ENST00000538456 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
SMARCA4-206ENST00000538456 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
SMARCA4-206ENST00000538456 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
SMARCA4-206ENST00000538456 TNP1P09430 55 aa4.72□□□□□ -1.65
SMARCA4-206ENST00000538456 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
SMARCA4-206ENST00000538456 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
SMARCA4-206ENST00000538456 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
SMARCA4-206ENST00000538456 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SMARCA4-206ENST00000538456 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
SMARCA4-206ENST00000538456 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
SMARCA4-206ENST00000538456 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
SMARCA4-206ENST00000538456 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
SMARCA4-206ENST00000538456 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
SMARCA4-206ENST00000538456 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
SMARCA4-206ENST00000538456 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.69
SMARCA4-206ENST00000538456 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SMARCA4-206ENST00000538456 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
SMARCA4-206ENST00000538456 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
SMARCA4-206ENST00000538456 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
SMARCA4-206ENST00000538456 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
SMARCA4-206ENST00000538456 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
SMARCA4-206ENST00000538456 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
SMARCA4-206ENST00000538456 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
SMARCA4-206ENST00000538456 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
SMARCA4-206ENST00000538456 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
SMARCA4-206ENST00000538456 MT1AP04731 61 aa4.19□□□□□ -1.74
SMARCA4-206ENST00000538456 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
SMARCA4-206ENST00000538456 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SMARCA4-206ENST00000538456 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
SMARCA4-206ENST00000538456 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
SMARCA4-206ENST00000538456 MT3P25713 68 aa3.84□□□□□ -1.79
SMARCA4-206ENST00000538456 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
SMARCA4-206ENST00000538456 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
SMARCA4-206ENST00000538456 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
SMARCA4-206ENST00000538456 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
SMARCA4-206ENST00000538456 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SMARCA4-206ENST00000538456 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
SMARCA4-206ENST00000538456 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SMARCA4-206ENST00000538456 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
SMARCA4-206ENST00000538456 INE1O15225 51 aa3.09□□□□□ -1.91
SMARCA4-206ENST00000538456 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SMARCA4-206ENST00000538456 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
SMARCA4-206ENST00000538456 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SMARCA4-206ENST00000538456 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
SMARCA4-206ENST00000538456 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SMARCA4-206ENST00000538456 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
SMARCA4-206ENST00000538456 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SMARCA4-206ENST00000538456 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SMARCA4-206ENST00000538456 PRM1P04553 51 aa2.53□□□□□ -2
SMARCA4-206ENST00000538456 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SMARCA4-206ENST00000538456 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 100.2 ms