RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
LRP6-203ENST00000538239 MT1MQ8N339 61 aa1.71□□□□□ -2.14
LRP6-203ENST00000538239 LOC100996750A0A140TA64 210 aa1.71□□□□□ -2.14
LRP6-203ENST00000538239 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
LRP6-203ENST00000538239 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
LRP6-203ENST00000538239 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
LRP6-203ENST00000538239 KRTAP9-7A8MTY7 169 aa1.68□□□□□ -2.14
LRP6-203ENST00000538239 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
LRP6-203ENST00000538239 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
LRP6-203ENST00000538239 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
LRP6-203ENST00000538239 MT3P25713 68 aa1.66□□□□□ -2.14
LRP6-203ENST00000538239 KMT2DO14686 5537 aa1.64□□□□□ -2.15
LRP6-203ENST00000538239 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
LRP6-203ENST00000538239 LCE1DQ5T752 114 aa1.63□□□□□ -2.15
LRP6-203ENST00000538239 HMCN2Q8NDA2 5059 aa1.62□□□□□ -2.15
LRP6-203ENST00000538239 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
LRP6-203ENST00000538239 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.61□□□□□ -2.15
LRP6-203ENST00000538239 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
LRP6-203ENST00000538239 FSIP2Q5CZC0 6907 aa1.61□□□□□ -2.15
LRP6-203ENST00000538239 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
LRP6-203ENST00000538239 KRTAP19-7Q3SYF9 63 aa1.6□□□□□ -2.15
LRP6-203ENST00000538239 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
LRP6-203ENST00000538239 MDN1Q9NU22 5596 aa1.59□□□□□ -2.16
LRP6-203ENST00000538239 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
LRP6-203ENST00000538239 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
LRP6-203ENST00000538239 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
LRP6-203ENST00000538239 KRTAP4-9Q9BYQ8 210 aa1.58□□□□□ -2.16
LRP6-203ENST00000538239 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
LRP6-203ENST00000538239 MT1AP04731 61 aa1.56□□□□□ -2.16
LRP6-203ENST00000538239 LCE5AQ5TCM9 118 aa1.55□□□□□ -2.16
LRP6-203ENST00000538239 PRM1P04553 51 aa1.55□□□□□ -2.16
LRP6-203ENST00000538239 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP4-6Q9BYQ5 205 aa1.52□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
LRP6-203ENST00000538239 LCE4AQ5TA78 99 aa1.5□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
LRP6-203ENST00000538239 MUC2Q02817 5179 aa1.48□□□□□ -2.17
LRP6-203ENST00000538239 KRTAP9-4Q9BYQ2 154 aa1.47□□□□□ -2.17
LRP6-203ENST00000538239 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
LRP6-203ENST00000538239 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
LRP6-203ENST00000538239 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
LRP6-203ENST00000538239 LCE1EQ5T753 118 aa1.41□□□□□ -2.18
LRP6-203ENST00000538239 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
LRP6-203ENST00000538239 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.18
LRP6-203ENST00000538239 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
LRP6-203ENST00000538239 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
LRP6-203ENST00000538239 USH2AO75445 5202 aa1.35□□□□□ -2.19
LRP6-203ENST00000538239 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
LRP6-203ENST00000538239 KRTAP5-9P26371 169 aa1.33□□□□□ -2.2
LRP6-203ENST00000538239 NEBP20929 6669 aa1.32□□□□□ -2.2
LRP6-203ENST00000538239 OBSCNQ5VST9 7968 aa1.31□□□□□ -2.2
LRP6-203ENST00000538239 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
LRP6-203ENST00000538239 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
LRP6-203ENST00000538239 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
LRP6-203ENST00000538239 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
LRP6-203ENST00000538239 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
LRP6-203ENST00000538239 KRTAP5-4Q6L8H1 288 aa1.19□□□□□ -2.22
LRP6-203ENST00000538239 KRTAP4-2Q9BYR5 136 aa1.18□□□□□ -2.22
LRP6-203ENST00000538239 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
LRP6-203ENST00000538239 KRTAP4-11Q9BYQ6 195 aa1.17□□□□□ -2.22
LRP6-203ENST00000538239 KRTAP4-4Q9BYR3 166 aa1.16□□□□□ -2.22
LRP6-203ENST00000538239 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
LRP6-203ENST00000538239 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.24
LRP6-203ENST00000538239 KRTAP5-3Q6L8H2 238 aa1.06□□□□□ -2.24
LRP6-203ENST00000538239 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.24
LRP6-203ENST00000538239 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
LRP6-203ENST00000538239 KRTAP5-8O75690 187 aa0.98□□□□□ -2.25
LRP6-203ENST00000538239 MUC19Q7Z5P9 8384 aa0.95□□□□□ -2.26
LRP6-203ENST00000538239 PHGR1C9JFL3 82 aa0.9□□□□□ -2.26
LRP6-203ENST00000538239 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
LRP6-203ENST00000538239 KRTAP5-1Q6L8H4 278 aa0.8□□□□□ -2.28
LRP6-203ENST00000538239 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
LRP6-203ENST00000538239 KRTAP21-2Q3LI59 83 aa0.74□□□□□ -2.29
LRP6-203ENST00000538239 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
LRP6-203ENST00000538239 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LRP6-203ENST00000538239 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 284.1 ms