RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
DDB1-210ENST00000538129 TMEM258P61165 79 aa2.5□□□□□ -2.01
DDB1-210ENST00000538129 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
DDB1-210ENST00000538129 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
DDB1-210ENST00000538129 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
DDB1-210ENST00000538129 A0A1B0GU33 70 aa2.48□□□□□ -2.01
DDB1-210ENST00000538129 A0A1B0GU69 56 aa2.47□□□□□ -2.01
DDB1-210ENST00000538129 MT1XP80297 61 aa2.47□□□□□ -2.01
DDB1-210ENST00000538129 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
DDB1-210ENST00000538129 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
DDB1-210ENST00000538129 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
DDB1-210ENST00000538129 PRR15LQ9BU68 103 aa2.44□□□□□ -2.02
DDB1-210ENST00000538129 SPATA8Q6RVD6 105 aa2.43□□□□□ -2.02
DDB1-210ENST00000538129 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
DDB1-210ENST00000538129 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
DDB1-210ENST00000538129 KMT2DO14686 5537 aa2.41□□□□□ -2.02
DDB1-210ENST00000538129 A0A0D9SG42 100 aa2.4□□□□□ -2.03
DDB1-210ENST00000538129 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
DDB1-210ENST00000538129 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
DDB1-210ENST00000538129 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
DDB1-210ENST00000538129 UQCR11O14957 56 aa2.36□□□□□ -2.03
DDB1-210ENST00000538129 RPS28P62857 69 aaKnown RBP2.35□□□□□ -2.03
DDB1-210ENST00000538129 Q1T7F1 81 aa2.35□□□□□ -2.03
DDB1-210ENST00000538129 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
DDB1-210ENST00000538129 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
DDB1-210ENST00000538129 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
DDB1-210ENST00000538129 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
DDB1-210ENST00000538129 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
DDB1-210ENST00000538129 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
DDB1-210ENST00000538129 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
DDB1-210ENST00000538129 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
DDB1-210ENST00000538129 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
DDB1-210ENST00000538129 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
DDB1-210ENST00000538129 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
DDB1-210ENST00000538129 TNP1P09430 55 aa2.25□□□□□ -2.05
DDB1-210ENST00000538129 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
DDB1-210ENST00000538129 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
DDB1-210ENST00000538129 SPRR2EP22531 72 aa2.24□□□□□ -2.05
DDB1-210ENST00000538129 SPRR2BP35325 72 aa2.24□□□□□ -2.05
DDB1-210ENST00000538129 SPRR2AP35326 72 aa2.24□□□□□ -2.05
DDB1-210ENST00000538129 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
DDB1-210ENST00000538129 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
DDB1-210ENST00000538129 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
DDB1-210ENST00000538129 MT1EP04732 61 aa2.18□□□□□ -2.06
DDB1-210ENST00000538129 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
DDB1-210ENST00000538129 SPRR2DP22532 72 aa2.17□□□□□ -2.06
DDB1-210ENST00000538129 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
DDB1-210ENST00000538129 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
DDB1-210ENST00000538129 MT1GP13640 62 aa2.13□□□□□ -2.07
DDB1-210ENST00000538129 ROMO1P60602 79 aa2.12□□□□□ -2.07
DDB1-210ENST00000538129 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
DDB1-210ENST00000538129 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
DDB1-210ENST00000538129 MT1LQ93083 61 aa2.1□□□□□ -2.07
DDB1-210ENST00000538129 MT1MQ8N339 61 aa2.07□□□□□ -2.08
DDB1-210ENST00000538129 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
DDB1-210ENST00000538129 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
DDB1-210ENST00000538129 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
DDB1-210ENST00000538129 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
DDB1-210ENST00000538129 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
DDB1-210ENST00000538129 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
DDB1-210ENST00000538129 MT4P47944 62 aa1.88□□□□□ -2.11
DDB1-210ENST00000538129 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
DDB1-210ENST00000538129 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
DDB1-210ENST00000538129 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
DDB1-210ENST00000538129 MT1AP04731 61 aa1.8□□□□□ -2.12
DDB1-210ENST00000538129 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
DDB1-210ENST00000538129 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
DDB1-210ENST00000538129 INE1O15225 51 aa1.78□□□□□ -2.12
DDB1-210ENST00000538129 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
DDB1-210ENST00000538129 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
DDB1-210ENST00000538129 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
DDB1-210ENST00000538129 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
DDB1-210ENST00000538129 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
DDB1-210ENST00000538129 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
DDB1-210ENST00000538129 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
DDB1-210ENST00000538129 PRM1P04553 51 aa1.07□□□□□ -2.24
DDB1-210ENST00000538129 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
DDB1-210ENST00000538129 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 108 ms