RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MT1MQ8N339 61 aa6.09□□□□□ -1.43
SFSWAP-205ENST00000537164 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SFSWAP-205ENST00000537164 V9GYY9 64 aa5.99□□□□□ -1.45
SFSWAP-205ENST00000537164 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SFSWAP-205ENST00000537164 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
SFSWAP-205ENST00000537164 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
SFSWAP-205ENST00000537164 Q1T7F1 81 aa5.97□□□□□ -1.45
SFSWAP-205ENST00000537164 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SFSWAP-205ENST00000537164 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
SFSWAP-205ENST00000537164 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
SFSWAP-205ENST00000537164 PSPHP1O15172 72 aa5.91□□□□□ -1.46
SFSWAP-205ENST00000537164 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
SFSWAP-205ENST00000537164 K7ERS5 55 aa5.89□□□□□ -1.47
SFSWAP-205ENST00000537164 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
SFSWAP-205ENST00000537164 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
SFSWAP-205ENST00000537164 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
SFSWAP-205ENST00000537164 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
SFSWAP-205ENST00000537164 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
SFSWAP-205ENST00000537164 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SFSWAP-205ENST00000537164 MT4P47944 62 aa5.75□□□□□ -1.49
SFSWAP-205ENST00000537164 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
SFSWAP-205ENST00000537164 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
SFSWAP-205ENST00000537164 A6NED7 52 aa5.71□□□□□ -1.5
SFSWAP-205ENST00000537164 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
SFSWAP-205ENST00000537164 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
SFSWAP-205ENST00000537164 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
SFSWAP-205ENST00000537164 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
SFSWAP-205ENST00000537164 ROMO1P60602 79 aa5.52□□□□□ -1.53
SFSWAP-205ENST00000537164 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
SFSWAP-205ENST00000537164 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
SFSWAP-205ENST00000537164 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
SFSWAP-205ENST00000537164 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
SFSWAP-205ENST00000537164 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
SFSWAP-205ENST00000537164 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SFSWAP-205ENST00000537164 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
SFSWAP-205ENST00000537164 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
SFSWAP-205ENST00000537164 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
SFSWAP-205ENST00000537164 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
SFSWAP-205ENST00000537164 MT1AP04731 61 aa5.22□□□□□ -1.57
SFSWAP-205ENST00000537164 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
SFSWAP-205ENST00000537164 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
SFSWAP-205ENST00000537164 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
SFSWAP-205ENST00000537164 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
SFSWAP-205ENST00000537164 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
SFSWAP-205ENST00000537164 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
SFSWAP-205ENST00000537164 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
SFSWAP-205ENST00000537164 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
SFSWAP-205ENST00000537164 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
SFSWAP-205ENST00000537164 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
SFSWAP-205ENST00000537164 H3BS24 57 aa4.82□□□□□ -1.64
SFSWAP-205ENST00000537164 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
SFSWAP-205ENST00000537164 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
SFSWAP-205ENST00000537164 MT3P25713 68 aa4.77□□□□□ -1.65
SFSWAP-205ENST00000537164 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
SFSWAP-205ENST00000537164 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SFSWAP-205ENST00000537164 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
SFSWAP-205ENST00000537164 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
SFSWAP-205ENST00000537164 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
SFSWAP-205ENST00000537164 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
SFSWAP-205ENST00000537164 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SFSWAP-205ENST00000537164 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
SFSWAP-205ENST00000537164 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
SFSWAP-205ENST00000537164 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
SFSWAP-205ENST00000537164 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
SFSWAP-205ENST00000537164 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SFSWAP-205ENST00000537164 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
SFSWAP-205ENST00000537164 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
SFSWAP-205ENST00000537164 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SFSWAP-205ENST00000537164 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
SFSWAP-205ENST00000537164 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SFSWAP-205ENST00000537164 INE1O15225 51 aa3.54□□□□□ -1.84
SFSWAP-205ENST00000537164 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
SFSWAP-205ENST00000537164 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
SFSWAP-205ENST00000537164 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SFSWAP-205ENST00000537164 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SFSWAP-205ENST00000537164 PRM1P04553 51 aa2.81□□□□□ -1.96
SFSWAP-205ENST00000537164 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SFSWAP-205ENST00000537164 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 24.2 ms