RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
LTBR-206ENST00000536876 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
LTBR-206ENST00000536876 A0A1B0GU33 70 aa6.15□□□□□ -1.42
LTBR-206ENST00000536876 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
LTBR-206ENST00000536876 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
LTBR-206ENST00000536876 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
LTBR-206ENST00000536876 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
LTBR-206ENST00000536876 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
LTBR-206ENST00000536876 V9GYY9 64 aa6.1□□□□□ -1.43
LTBR-206ENST00000536876 Q1T7F1 81 aa6.07□□□□□ -1.44
LTBR-206ENST00000536876 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
LTBR-206ENST00000536876 PSPHP1O15172 72 aa6.03□□□□□ -1.44
LTBR-206ENST00000536876 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
LTBR-206ENST00000536876 UQCR11O14957 56 aa5.97□□□□□ -1.45
LTBR-206ENST00000536876 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
LTBR-206ENST00000536876 A8MU10 97 aa5.94□□□□□ -1.46
LTBR-206ENST00000536876 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
LTBR-206ENST00000536876 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
LTBR-206ENST00000536876 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
LTBR-206ENST00000536876 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
LTBR-206ENST00000536876 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
LTBR-206ENST00000536876 A6NED7 52 aa5.86□□□□□ -1.47
LTBR-206ENST00000536876 TNP1P09430 55 aa5.85□□□□□ -1.47
LTBR-206ENST00000536876 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
LTBR-206ENST00000536876 K7ERS5 55 aa5.7□□□□□ -1.5
LTBR-206ENST00000536876 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
LTBR-206ENST00000536876 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
LTBR-206ENST00000536876 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
LTBR-206ENST00000536876 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
LTBR-206ENST00000536876 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
LTBR-206ENST00000536876 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
LTBR-206ENST00000536876 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
LTBR-206ENST00000536876 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
LTBR-206ENST00000536876 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
LTBR-206ENST00000536876 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
LTBR-206ENST00000536876 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
LTBR-206ENST00000536876 ROMO1P60602 79 aa5.38□□□□□ -1.55
LTBR-206ENST00000536876 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
LTBR-206ENST00000536876 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
LTBR-206ENST00000536876 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
LTBR-206ENST00000536876 MT1AP04731 61 aa5.26□□□□□ -1.57
LTBR-206ENST00000536876 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
LTBR-206ENST00000536876 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
LTBR-206ENST00000536876 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
LTBR-206ENST00000536876 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
LTBR-206ENST00000536876 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
LTBR-206ENST00000536876 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
LTBR-206ENST00000536876 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
LTBR-206ENST00000536876 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
LTBR-206ENST00000536876 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
LTBR-206ENST00000536876 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
LTBR-206ENST00000536876 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
LTBR-206ENST00000536876 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
LTBR-206ENST00000536876 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
LTBR-206ENST00000536876 MT3P25713 68 aa4.79□□□□□ -1.64
LTBR-206ENST00000536876 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
LTBR-206ENST00000536876 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
LTBR-206ENST00000536876 H3BS24 57 aa4.42□□□□□ -1.7
LTBR-206ENST00000536876 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
LTBR-206ENST00000536876 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
LTBR-206ENST00000536876 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
LTBR-206ENST00000536876 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
LTBR-206ENST00000536876 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
LTBR-206ENST00000536876 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
LTBR-206ENST00000536876 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
LTBR-206ENST00000536876 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
LTBR-206ENST00000536876 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
LTBR-206ENST00000536876 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
LTBR-206ENST00000536876 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
LTBR-206ENST00000536876 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
LTBR-206ENST00000536876 KRTAP21-2Q3LI59 83 aa3.51□□□□□ -1.85
LTBR-206ENST00000536876 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
LTBR-206ENST00000536876 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
LTBR-206ENST00000536876 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
LTBR-206ENST00000536876 INE1O15225 51 aa3.04□□□□□ -1.92
LTBR-206ENST00000536876 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
LTBR-206ENST00000536876 PRM1P04553 51 aa2.8□□□□□ -1.96
LTBR-206ENST00000536876 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 80.2 ms