RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 NSD1Q96L73 2696 aaPredicted RBP1.73□□□□□ -2.13
KNTC1-209ENST00000536625 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
KNTC1-209ENST00000536625 PKHD1P08F94 4074 aa1.72□□□□□ -2.13
KNTC1-209ENST00000536625 TENM3Q9P273 2699 aa1.72□□□□□ -2.13
KNTC1-209ENST00000536625 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
KNTC1-209ENST00000536625 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
KNTC1-209ENST00000536625 RYR2Q92736 4967 aa1.7□□□□□ -2.14
KNTC1-209ENST00000536625 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
KNTC1-209ENST00000536625 HERC2O95714 4834 aa1.69□□□□□ -2.14
KNTC1-209ENST00000536625 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
KNTC1-209ENST00000536625 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
KNTC1-209ENST00000536625 FAT1Q14517 4588 aa1.67□□□□□ -2.14
KNTC1-209ENST00000536625 TENM1Q9UKZ4 2725 aa1.67□□□□□ -2.14
KNTC1-209ENST00000536625 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
KNTC1-209ENST00000536625 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
KNTC1-209ENST00000536625 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
KNTC1-209ENST00000536625 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
KNTC1-209ENST00000536625 HERC1Q15751 4861 aa1.63□□□□□ -2.15
KNTC1-209ENST00000536625 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
KNTC1-209ENST00000536625 M0R2T5 61 aa1.61□□□□□ -2.15
KNTC1-209ENST00000536625 SMR3BP02814 79 aaPredicted RBP1.61□□□□□ -2.15
KNTC1-209ENST00000536625 LPAP08519 4548 aa1.6□□□□□ -2.15
KNTC1-209ENST00000536625 MUC2Q02817 5179 aa1.58□□□□□ -2.16
KNTC1-209ENST00000536625 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
KNTC1-209ENST00000536625 ABCA13Q86UQ4 5058 aa1.55□□□□□ -2.16
KNTC1-209ENST00000536625 KRTAP19-2Q3LHN2 52 aa1.46□□□□□ -2.18
KNTC1-209ENST00000536625 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
KNTC1-209ENST00000536625 SPRR2GQ9BYE4 73 aa1.46□□□□□ -2.18
KNTC1-209ENST00000536625 FAT4Q6V0I7 4981 aa1.45□□□□□ -2.18
KNTC1-209ENST00000536625 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
KNTC1-209ENST00000536625 PRM1P04553 51 aa1.42□□□□□ -2.18
KNTC1-209ENST00000536625 LRP2P98164 4655 aa1.42□□□□□ -2.18
KNTC1-209ENST00000536625 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
KNTC1-209ENST00000536625 HMCN2Q8NDA2 5059 aa1.39□□□□□ -2.19
KNTC1-209ENST00000536625 MT1XP80297 61 aa1.38□□□□□ -2.19
KNTC1-209ENST00000536625 MT1HL1P0DM35 61 aa1.37□□□□□ -2.19
KNTC1-209ENST00000536625 KRTAP19-8Q3LI54 63 aa1.35□□□□□ -2.19
KNTC1-209ENST00000536625 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
KNTC1-209ENST00000536625 NEBP20929 6669 aa1.32□□□□□ -2.2
KNTC1-209ENST00000536625 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
KNTC1-209ENST00000536625 MT1AP04731 61 aa1.3□□□□□ -2.2
KNTC1-209ENST00000536625 MT1BP07438 61 aa1.3□□□□□ -2.2
KNTC1-209ENST00000536625 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
KNTC1-209ENST00000536625 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
KNTC1-209ENST00000536625 MT1EP04732 61 aa1.26□□□□□ -2.21
KNTC1-209ENST00000536625 KRTAP6-2Q3LI66 62 aa1.24□□□□□ -2.21
KNTC1-209ENST00000536625 MT1LQ93083 61 aa1.24□□□□□ -2.21
KNTC1-209ENST00000536625 MT1FP04733 61 aa1.23□□□□□ -2.21
KNTC1-209ENST00000536625 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
KNTC1-209ENST00000536625 MT2AP02795 61 aa1.22□□□□□ -2.21
KNTC1-209ENST00000536625 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
KNTC1-209ENST00000536625 MT1GP13640 62 aa1.18□□□□□ -2.22
KNTC1-209ENST00000536625 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
KNTC1-209ENST00000536625 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.23
KNTC1-209ENST00000536625 USH2AO75445 5202 aa1.15□□□□□ -2.23
KNTC1-209ENST00000536625 KMT2DO14686 5537 aa1.13□□□□□ -2.23
KNTC1-209ENST00000536625 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
KNTC1-209ENST00000536625 SPRR2AP35326 72 aa1.1□□□□□ -2.23
KNTC1-209ENST00000536625 MT1HP80294 61 aa1.1□□□□□ -2.23
KNTC1-209ENST00000536625 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
KNTC1-209ENST00000536625 SPRR2DP22532 72 aa1.09□□□□□ -2.23
KNTC1-209ENST00000536625 SPRR2BP35325 72 aa1.09□□□□□ -2.23
KNTC1-209ENST00000536625 SPRR2EP22531 72 aa1.07□□□□□ -2.24
KNTC1-209ENST00000536625 MT1MQ8N339 61 aa1.07□□□□□ -2.24
KNTC1-209ENST00000536625 KRTAP6-1Q3LI64 71 aa1.05□□□□□ -2.24
KNTC1-209ENST00000536625 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
KNTC1-209ENST00000536625 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
KNTC1-209ENST00000536625 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
KNTC1-209ENST00000536625 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
KNTC1-209ENST00000536625 MDN1Q9NU22 5596 aa1□□□□□ -2.25
KNTC1-209ENST00000536625 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
KNTC1-209ENST00000536625 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
KNTC1-209ENST00000536625 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
KNTC1-209ENST00000536625 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
KNTC1-209ENST00000536625 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
KNTC1-209ENST00000536625 MT4P47944 62 aa0.79□□□□□ -2.28
KNTC1-209ENST00000536625 KRTAP20-2Q3LI61 65 aa0.63□□□□□ -2.31
KNTC1-209ENST00000536625 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms