RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
PRKDC-206ENST00000536429 PSPHP1O15172 72 aa4.67□□□□□ -1.66
PRKDC-206ENST00000536429 MT1MQ8N339 61 aa4.66□□□□□ -1.66
PRKDC-206ENST00000536429 Q1T7F1 81 aa4.63□□□□□ -1.67
PRKDC-206ENST00000536429 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
PRKDC-206ENST00000536429 V9GYY9 64 aa4.61□□□□□ -1.67
PRKDC-206ENST00000536429 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PRKDC-206ENST00000536429 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
PRKDC-206ENST00000536429 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
PRKDC-206ENST00000536429 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
PRKDC-206ENST00000536429 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
PRKDC-206ENST00000536429 K7ERS5 55 aa4.52□□□□□ -1.69
PRKDC-206ENST00000536429 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
PRKDC-206ENST00000536429 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
PRKDC-206ENST00000536429 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
PRKDC-206ENST00000536429 A6NED7 52 aa4.48□□□□□ -1.69
PRKDC-206ENST00000536429 H3BS24 57 aa4.48□□□□□ -1.69
PRKDC-206ENST00000536429 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
PRKDC-206ENST00000536429 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
PRKDC-206ENST00000536429 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
PRKDC-206ENST00000536429 MT4P47944 62 aa4.41□□□□□ -1.7
PRKDC-206ENST00000536429 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
PRKDC-206ENST00000536429 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
PRKDC-206ENST00000536429 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
PRKDC-206ENST00000536429 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
PRKDC-206ENST00000536429 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PRKDC-206ENST00000536429 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
PRKDC-206ENST00000536429 ROMO1P60602 79 aa4.29□□□□□ -1.72
PRKDC-206ENST00000536429 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
PRKDC-206ENST00000536429 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
PRKDC-206ENST00000536429 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
PRKDC-206ENST00000536429 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
PRKDC-206ENST00000536429 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
PRKDC-206ENST00000536429 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
PRKDC-206ENST00000536429 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
PRKDC-206ENST00000536429 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
PRKDC-206ENST00000536429 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
PRKDC-206ENST00000536429 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
PRKDC-206ENST00000536429 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
PRKDC-206ENST00000536429 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
PRKDC-206ENST00000536429 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
PRKDC-206ENST00000536429 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
PRKDC-206ENST00000536429 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
PRKDC-206ENST00000536429 MT1AP04731 61 aa3.98□□□□□ -1.77
PRKDC-206ENST00000536429 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
PRKDC-206ENST00000536429 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
PRKDC-206ENST00000536429 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
PRKDC-206ENST00000536429 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
PRKDC-206ENST00000536429 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
PRKDC-206ENST00000536429 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
PRKDC-206ENST00000536429 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
PRKDC-206ENST00000536429 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
PRKDC-206ENST00000536429 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
PRKDC-206ENST00000536429 MT3P25713 68 aa3.62□□□□□ -1.83
PRKDC-206ENST00000536429 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
PRKDC-206ENST00000536429 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
PRKDC-206ENST00000536429 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
PRKDC-206ENST00000536429 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
PRKDC-206ENST00000536429 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
PRKDC-206ENST00000536429 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PRKDC-206ENST00000536429 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
PRKDC-206ENST00000536429 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PRKDC-206ENST00000536429 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
PRKDC-206ENST00000536429 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
PRKDC-206ENST00000536429 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
PRKDC-206ENST00000536429 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
PRKDC-206ENST00000536429 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
PRKDC-206ENST00000536429 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
PRKDC-206ENST00000536429 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
PRKDC-206ENST00000536429 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
PRKDC-206ENST00000536429 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
PRKDC-206ENST00000536429 INE1O15225 51 aa2.5□□□□□ -2.01
PRKDC-206ENST00000536429 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
PRKDC-206ENST00000536429 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
PRKDC-206ENST00000536429 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PRKDC-206ENST00000536429 PRM1P04553 51 aa2.22□□□□□ -2.05
PRKDC-206ENST00000536429 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PRKDC-206ENST00000536429 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms