RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 P0C880 135 aa3.76□□□□□ -1.81
CHD4-204ENST00000535810 A8MU10 97 aa3.74□□□□□ -1.81
CHD4-204ENST00000535810 R4GN34 69 aa3.74□□□□□ -1.81
CHD4-204ENST00000535810 K7ERS5 55 aa3.73□□□□□ -1.81
CHD4-204ENST00000535810 MT1XP80297 61 aa3.73□□□□□ -1.81
CHD4-204ENST00000535810 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
CHD4-204ENST00000535810 M0QZ58 72 aa3.71□□□□□ -1.82
CHD4-204ENST00000535810 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
CHD4-204ENST00000535810 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
CHD4-204ENST00000535810 SPRR2EP22531 72 aa3.68□□□□□ -1.82
CHD4-204ENST00000535810 SPRR2BP35325 72 aa3.68□□□□□ -1.82
CHD4-204ENST00000535810 SPRR2AP35326 72 aa3.68□□□□□ -1.82
CHD4-204ENST00000535810 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
CHD4-204ENST00000535810 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
CHD4-204ENST00000535810 A0A0D9SG42 100 aa3.64□□□□□ -1.83
CHD4-204ENST00000535810 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
CHD4-204ENST00000535810 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
CHD4-204ENST00000535810 ROMO1P60602 79 aa3.61□□□□□ -1.83
CHD4-204ENST00000535810 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
CHD4-204ENST00000535810 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
CHD4-204ENST00000535810 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
CHD4-204ENST00000535810 SPRR2DP22532 72 aa3.57□□□□□ -1.84
CHD4-204ENST00000535810 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
CHD4-204ENST00000535810 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
CHD4-204ENST00000535810 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
CHD4-204ENST00000535810 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
CHD4-204ENST00000535810 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CHD4-204ENST00000535810 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
CHD4-204ENST00000535810 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
CHD4-204ENST00000535810 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
CHD4-204ENST00000535810 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
CHD4-204ENST00000535810 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
CHD4-204ENST00000535810 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
CHD4-204ENST00000535810 MT1EP04732 61 aa3.3□□□□□ -1.88
CHD4-204ENST00000535810 TNP1P09430 55 aa3.3□□□□□ -1.88
CHD4-204ENST00000535810 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
CHD4-204ENST00000535810 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
CHD4-204ENST00000535810 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
CHD4-204ENST00000535810 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
CHD4-204ENST00000535810 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
CHD4-204ENST00000535810 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CHD4-204ENST00000535810 MT1GP13640 62 aa3.18□□□□□ -1.9
CHD4-204ENST00000535810 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
CHD4-204ENST00000535810 MT4P47944 62 aa3.15□□□□□ -1.91
CHD4-204ENST00000535810 MT1LQ93083 61 aa3.15□□□□□ -1.91
CHD4-204ENST00000535810 MT1MQ8N339 61 aa3.14□□□□□ -1.91
CHD4-204ENST00000535810 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
CHD4-204ENST00000535810 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CHD4-204ENST00000535810 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
CHD4-204ENST00000535810 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
CHD4-204ENST00000535810 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
CHD4-204ENST00000535810 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
CHD4-204ENST00000535810 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
CHD4-204ENST00000535810 INE1O15225 51 aa2.95□□□□□ -1.94
CHD4-204ENST00000535810 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CHD4-204ENST00000535810 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
CHD4-204ENST00000535810 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
CHD4-204ENST00000535810 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CHD4-204ENST00000535810 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
CHD4-204ENST00000535810 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
CHD4-204ENST00000535810 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
CHD4-204ENST00000535810 MT1AP04731 61 aa2.68□□□□□ -1.98
CHD4-204ENST00000535810 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
CHD4-204ENST00000535810 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
CHD4-204ENST00000535810 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
CHD4-204ENST00000535810 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
CHD4-204ENST00000535810 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
CHD4-204ENST00000535810 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CHD4-204ENST00000535810 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CHD4-204ENST00000535810 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
CHD4-204ENST00000535810 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CHD4-204ENST00000535810 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CHD4-204ENST00000535810 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CHD4-204ENST00000535810 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CHD4-204ENST00000535810 PRM1P04553 51 aa1.81□□□□□ -2.12
CHD4-204ENST00000535810 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CHD4-204ENST00000535810 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CHD4-204ENST00000535810 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 8.3 ms