RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.14
SSPN-204ENST00000535504 LCE5AQ5TCM9 118 aa7.95□□□□□ -1.14
SSPN-204ENST00000535504 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
SSPN-204ENST00000535504 MT1GP13640 62 aa7.88□□□□□ -1.15
SSPN-204ENST00000535504 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
SSPN-204ENST00000535504 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
SSPN-204ENST00000535504 MT1LQ93083 61 aa7.78□□□□□ -1.16
SSPN-204ENST00000535504 MT1MQ8N339 61 aa7.69□□□□□ -1.18
SSPN-204ENST00000535504 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
SSPN-204ENST00000535504 ROMO1P60602 79 aa7.64□□□□□ -1.19
SSPN-204ENST00000535504 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
SSPN-204ENST00000535504 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
SSPN-204ENST00000535504 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
SSPN-204ENST00000535504 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
SSPN-204ENST00000535504 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
SSPN-204ENST00000535504 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
SSPN-204ENST00000535504 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SSPN-204ENST00000535504 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
SSPN-204ENST00000535504 BRK1Q8WUW1 75 aa7.26□□□□□ -1.25
SSPN-204ENST00000535504 SVIPQ8NHG7 77 aa7.22□□□□□ -1.25
SSPN-204ENST00000535504 MT4P47944 62 aa7.19□□□□□ -1.26
SSPN-204ENST00000535504 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
SSPN-204ENST00000535504 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
SSPN-204ENST00000535504 KRTAP5-4Q6L8H1 288 aa7.13□□□□□ -1.27
SSPN-204ENST00000535504 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
SSPN-204ENST00000535504 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
SSPN-204ENST00000535504 HMCN1Q96RW7 5635 aa6.95□□□□□ -1.3
SSPN-204ENST00000535504 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
SSPN-204ENST00000535504 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
SSPN-204ENST00000535504 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
SSPN-204ENST00000535504 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
SSPN-204ENST00000535504 GPR98Q8WXG9 6306 aa6.76□□□□□ -1.33
SSPN-204ENST00000535504 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
SSPN-204ENST00000535504 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
SSPN-204ENST00000535504 MT1AP04731 61 aa6.66□□□□□ -1.34
SSPN-204ENST00000535504 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
SSPN-204ENST00000535504 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
SSPN-204ENST00000535504 AHNAK2Q8IVF2 5795 aa6.58□□□□□ -1.36
SSPN-204ENST00000535504 KRTAP6-1Q3LI64 71 aa6.55□□□□□ -1.36
SSPN-204ENST00000535504 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
SSPN-204ENST00000535504 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
SSPN-204ENST00000535504 PRAC1Q96KF2 57 aa6.43□□□□□ -1.38
SSPN-204ENST00000535504 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
SSPN-204ENST00000535504 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
SSPN-204ENST00000535504 KRTAP5-7Q6L8G8 165 aa6.24□□□□□ -1.41
SSPN-204ENST00000535504 KRTAP6-2Q3LI66 62 aa6.23□□□□□ -1.41
SSPN-204ENST00000535504 MT3P25713 68 aa6.14□□□□□ -1.43
SSPN-204ENST00000535504 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
SSPN-204ENST00000535504 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
SSPN-204ENST00000535504 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
SSPN-204ENST00000535504 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
SSPN-204ENST00000535504 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
SSPN-204ENST00000535504 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
SSPN-204ENST00000535504 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
SSPN-204ENST00000535504 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
SSPN-204ENST00000535504 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
SSPN-204ENST00000535504 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
SSPN-204ENST00000535504 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
SSPN-204ENST00000535504 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
SSPN-204ENST00000535504 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
SSPN-204ENST00000535504 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
SSPN-204ENST00000535504 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
SSPN-204ENST00000535504 LCE3EQ5T5B0 92 aa5□□□□□ -1.61
SSPN-204ENST00000535504 H3BS24 57 aa4.87□□□□□ -1.63
SSPN-204ENST00000535504 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
SSPN-204ENST00000535504 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
SSPN-204ENST00000535504 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SSPN-204ENST00000535504 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
SSPN-204ENST00000535504 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SSPN-204ENST00000535504 INE1O15225 51 aa4.43□□□□□ -1.7
SSPN-204ENST00000535504 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
SSPN-204ENST00000535504 PHGR1C9JFL3 82 aa3.95□□□□□ -1.78
SSPN-204ENST00000535504 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
SSPN-204ENST00000535504 PRM1P04553 51 aa3.89□□□□□ -1.79
SSPN-204ENST00000535504 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
SSPN-204ENST00000535504 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SSPN-204ENST00000535504 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms