RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
CLSTN3-205ENST00000535452 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
CLSTN3-205ENST00000535452 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
CLSTN3-205ENST00000535452 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
CLSTN3-205ENST00000535452 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
CLSTN3-205ENST00000535452 TMEM258P61165 79 aa4.51□□□□□ -1.69
CLSTN3-205ENST00000535452 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
CLSTN3-205ENST00000535452 UQCR11O14957 56 aa4.5□□□□□ -1.69
CLSTN3-205ENST00000535452 K7ERS5 55 aa4.49□□□□□ -1.69
CLSTN3-205ENST00000535452 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
CLSTN3-205ENST00000535452 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
CLSTN3-205ENST00000535452 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
CLSTN3-205ENST00000535452 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
CLSTN3-205ENST00000535452 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
CLSTN3-205ENST00000535452 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
CLSTN3-205ENST00000535452 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
CLSTN3-205ENST00000535452 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
CLSTN3-205ENST00000535452 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
CLSTN3-205ENST00000535452 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
CLSTN3-205ENST00000535452 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
CLSTN3-205ENST00000535452 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
CLSTN3-205ENST00000535452 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
CLSTN3-205ENST00000535452 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
CLSTN3-205ENST00000535452 V9GYY9 64 aa4.25□□□□□ -1.73
CLSTN3-205ENST00000535452 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
CLSTN3-205ENST00000535452 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
CLSTN3-205ENST00000535452 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
CLSTN3-205ENST00000535452 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
CLSTN3-205ENST00000535452 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
CLSTN3-205ENST00000535452 PSPHP1O15172 72 aa4.14□□□□□ -1.75
CLSTN3-205ENST00000535452 Q1T7F1 81 aa4.14□□□□□ -1.75
CLSTN3-205ENST00000535452 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
CLSTN3-205ENST00000535452 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
CLSTN3-205ENST00000535452 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
CLSTN3-205ENST00000535452 A6NED7 52 aa4.09□□□□□ -1.75
CLSTN3-205ENST00000535452 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
CLSTN3-205ENST00000535452 MT1AP04731 61 aa4.01□□□□□ -1.77
CLSTN3-205ENST00000535452 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
CLSTN3-205ENST00000535452 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
CLSTN3-205ENST00000535452 ROMO1P60602 79 aa3.98□□□□□ -1.77
CLSTN3-205ENST00000535452 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
CLSTN3-205ENST00000535452 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CLSTN3-205ENST00000535452 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CLSTN3-205ENST00000535452 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
CLSTN3-205ENST00000535452 KRTAP5-8O75690 187 aa3.81□□□□□ -1.8
CLSTN3-205ENST00000535452 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
CLSTN3-205ENST00000535452 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CLSTN3-205ENST00000535452 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
CLSTN3-205ENST00000535452 MT3P25713 68 aa3.74□□□□□ -1.81
CLSTN3-205ENST00000535452 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CLSTN3-205ENST00000535452 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
CLSTN3-205ENST00000535452 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CLSTN3-205ENST00000535452 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
CLSTN3-205ENST00000535452 H3BS24 57 aa3.68□□□□□ -1.82
CLSTN3-205ENST00000535452 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
CLSTN3-205ENST00000535452 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
CLSTN3-205ENST00000535452 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CLSTN3-205ENST00000535452 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CLSTN3-205ENST00000535452 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
CLSTN3-205ENST00000535452 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CLSTN3-205ENST00000535452 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
CLSTN3-205ENST00000535452 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
CLSTN3-205ENST00000535452 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CLSTN3-205ENST00000535452 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
CLSTN3-205ENST00000535452 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CLSTN3-205ENST00000535452 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
CLSTN3-205ENST00000535452 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
CLSTN3-205ENST00000535452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
CLSTN3-205ENST00000535452 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CLSTN3-205ENST00000535452 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
CLSTN3-205ENST00000535452 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CLSTN3-205ENST00000535452 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
CLSTN3-205ENST00000535452 INE1O15225 51 aa2.52□□□□□ -2.01
CLSTN3-205ENST00000535452 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CLSTN3-205ENST00000535452 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
CLSTN3-205ENST00000535452 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CLSTN3-205ENST00000535452 PRM1P04553 51 aa1.99□□□□□ -2.09
CLSTN3-205ENST00000535452 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 132.6 ms