RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
CPSF7-214ENST00000535222 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
CPSF7-214ENST00000535222 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
CPSF7-214ENST00000535222 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CPSF7-214ENST00000535222 SPATA8Q6RVD6 105 aa2.86□□□□□ -1.95
CPSF7-214ENST00000535222 Q6ZQY7 126 aa2.86□□□□□ -1.95
CPSF7-214ENST00000535222 COA5Q86WW8 74 aa2.86□□□□□ -1.95
CPSF7-214ENST00000535222 UQCR11O14957 56 aa2.85□□□□□ -1.95
CPSF7-214ENST00000535222 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
CPSF7-214ENST00000535222 LINC00575Q6W349 94 aa2.85□□□□□ -1.95
CPSF7-214ENST00000535222 LINC00472Q9H8W2 130 aa2.85□□□□□ -1.95
CPSF7-214ENST00000535222 DMAC1Q96GE9 116 aa2.84□□□□□ -1.95
CPSF7-214ENST00000535222 P0C880 135 aa2.82□□□□□ -1.96
CPSF7-214ENST00000535222 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
CPSF7-214ENST00000535222 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
CPSF7-214ENST00000535222 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
CPSF7-214ENST00000535222 A0A1B0GVX0 72 aa2.8□□□□□ -1.96
CPSF7-214ENST00000535222 MT1EP04732 61 aa2.8□□□□□ -1.96
CPSF7-214ENST00000535222 IGKV2-30P06310 120 aa2.78□□□□□ -1.96
CPSF7-214ENST00000535222 MT1GP13640 62 aa2.78□□□□□ -1.96
CPSF7-214ENST00000535222 DEFB116Q30KQ4 102 aa2.78□□□□□ -1.96
CPSF7-214ENST00000535222 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
CPSF7-214ENST00000535222 S4R3F8 94 aa2.77□□□□□ -1.97
CPSF7-214ENST00000535222 Q8N9L7 120 aa2.76□□□□□ -1.97
CPSF7-214ENST00000535222 Q5W150 140 aa2.75□□□□□ -1.97
CPSF7-214ENST00000535222 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
CPSF7-214ENST00000535222 A0A1B0GU69 56 aa2.72□□□□□ -1.97
CPSF7-214ENST00000535222 H0YAA0 97 aa2.72□□□□□ -1.97
CPSF7-214ENST00000535222 K7EQZ3 153 aa2.71□□□□□ -1.98
CPSF7-214ENST00000535222 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
CPSF7-214ENST00000535222 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
CPSF7-214ENST00000535222 MT1MQ8N339 61 aa2.7□□□□□ -1.98
CPSF7-214ENST00000535222 TP53AIP1Q9HCN2 124 aa2.7□□□□□ -1.98
CPSF7-214ENST00000535222 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
CPSF7-214ENST00000535222 ACYP2P14621 99 aa2.67□□□□□ -1.98
CPSF7-214ENST00000535222 IGKV2D-30A0A075B6S6 120 aa2.66□□□□□ -1.98
CPSF7-214ENST00000535222 A0A1B0GU33 70 aa2.63□□□□□ -1.99
CPSF7-214ENST00000535222 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
CPSF7-214ENST00000535222 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
CPSF7-214ENST00000535222 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
CPSF7-214ENST00000535222 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CPSF7-214ENST00000535222 MRPL34Q9BQ48 92 aaKnown RBP2.58□□□□□ -2
CPSF7-214ENST00000535222 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
CPSF7-214ENST00000535222 MT1LQ93083 61 aa2.55□□□□□ -2
CPSF7-214ENST00000535222 MMP24-AS1A0A0U1RRL7 71 aa2.54□□□□□ -2
CPSF7-214ENST00000535222 R4GN34 69 aa2.51□□□□□ -2.01
CPSF7-214ENST00000535222 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
CPSF7-214ENST00000535222 MT3P25713 68 aa2.46□□□□□ -2.02
CPSF7-214ENST00000535222 M0QZ58 72 aa2.44□□□□□ -2.02
CPSF7-214ENST00000535222 INE1O15225 51 aa2.41□□□□□ -2.02
CPSF7-214ENST00000535222 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
CPSF7-214ENST00000535222 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
CPSF7-214ENST00000535222 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
CPSF7-214ENST00000535222 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
CPSF7-214ENST00000535222 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CPSF7-214ENST00000535222 A0A0D9SG42 100 aa2.3□□□□□ -2.04
CPSF7-214ENST00000535222 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
CPSF7-214ENST00000535222 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
CPSF7-214ENST00000535222 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
CPSF7-214ENST00000535222 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
CPSF7-214ENST00000535222 LCE3CQ5T5A8 94 aa2.17□□□□□ -2.06
CPSF7-214ENST00000535222 MT1AP04731 61 aa2.16□□□□□ -2.06
CPSF7-214ENST00000535222 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
CPSF7-214ENST00000535222 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
CPSF7-214ENST00000535222 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
CPSF7-214ENST00000535222 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
CPSF7-214ENST00000535222 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
CPSF7-214ENST00000535222 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
CPSF7-214ENST00000535222 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
CPSF7-214ENST00000535222 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
CPSF7-214ENST00000535222 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CPSF7-214ENST00000535222 TNP1P09430 55 aa1.85□□□□□ -2.11
CPSF7-214ENST00000535222 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CPSF7-214ENST00000535222 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
CPSF7-214ENST00000535222 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
CPSF7-214ENST00000535222 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
CPSF7-214ENST00000535222 PRM1P04553 51 aa1.33□□□□□ -2.2
CPSF7-214ENST00000535222 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms