RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SNHG12Q9BXW3 62 aa-2.79□□□□□ -2.86
COPB1-212ENST00000534771 TCEAL7Q9BRU2 100 aa-2.8□□□□□ -2.86
COPB1-212ENST00000534771 AGLP35573 1532 aa-2.8□□□□□ -2.86
COPB1-212ENST00000534771 TFF3Q07654 80 aa-2.82□□□□□ -2.86
COPB1-212ENST00000534771 DEFB121Q5J5C9 76 aa-2.82□□□□□ -2.86
COPB1-212ENST00000534771 CLTCL1P53675 1640 aa-2.82□□□□□ -2.86
COPB1-212ENST00000534771 M0R143 59 aa-2.83□□□□□ -2.86
COPB1-212ENST00000534771 PRXQ9BXM0 1461 aa-2.84□□□□□ -2.86
COPB1-212ENST00000534771 K7EMI3 77 aa-2.84□□□□□ -2.86
COPB1-212ENST00000534771 M0R1W7 72 aa-2.85□□□□□ -2.87
COPB1-212ENST00000534771 ABCA8O94911 1581 aa-2.86□□□□□ -2.87
COPB1-212ENST00000534771 DUOX1Q9NRD9 1551 aa-2.86□□□□□ -2.87
COPB1-212ENST00000534771 ATP6V1G2-DDX39BF2Z307 99 aa-2.86□□□□□ -2.87
COPB1-212ENST00000534771 APELAP0DMC3 54 aa-2.86□□□□□ -2.87
COPB1-212ENST00000534771 TOP2AP11388 1531 aaKnown RBP-2.88□□□□□ -2.87
COPB1-212ENST00000534771 A0A096LPF7 62 aa-2.88□□□□□ -2.87
COPB1-212ENST00000534771 NDUFA1O15239 70 aa-2.88□□□□□ -2.87
COPB1-212ENST00000534771 IGIPA6NJ69 53 aa-2.89□□□□□ -2.87
COPB1-212ENST00000534771 UGGT1Q9NYU2 1555 aa-2.9□□□□□ -2.87
COPB1-212ENST00000534771 HTN3P15516 51 aa-2.91□□□□□ -2.88
COPB1-212ENST00000534771 CCDC18Q5T9S5 1454 aa-2.91□□□□□ -2.88
COPB1-212ENST00000534771 S100ZQ8WXG8 99 aa-2.92□□□□□ -2.88
COPB1-212ENST00000534771 ABCA9Q8IUA7 1624 aa-2.93□□□□□ -2.88
COPB1-212ENST00000534771 H3BUX3 64 aa-2.93□□□□□ -2.88
COPB1-212ENST00000534771 H3BVH4 76 aa-2.93□□□□□ -2.88
COPB1-212ENST00000534771 H0YGX0 51 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 PDCD5O14737 125 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 ATXN8Q156A1 80 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 Q9H521 79 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 IQGAP3Q86VI3 1631 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 ABCA6Q8N139 1617 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 ATP7AQ04656 1500 aa-2.94□□□□□ -2.88
COPB1-212ENST00000534771 PKIAP61925 76 aa-2.95□□□□□ -2.88
COPB1-212ENST00000534771 ABCA5Q8WWZ7 1642 aa-2.97□□□□□ -2.88
COPB1-212ENST00000534771 SERF2P84101 59 aa-2.97□□□□□ -2.88
COPB1-212ENST00000534771 ST20Q9HBF5 79 aa-2.97□□□□□ -2.88
COPB1-212ENST00000534771 ABCC8Q09428 1581 aa-2.97□□□□□ -2.89
COPB1-212ENST00000534771 IQGAP1P46940 1657 aa-2.98□□□□□ -2.89
COPB1-212ENST00000534771 ERICH3Q5RHP9 1530 aa-2.98□□□□□ -2.89
COPB1-212ENST00000534771 ADIRFQ15847 76 aa-2.99□□□□□ -2.89
COPB1-212ENST00000534771 V9GYS6 101 aa-2.99□□□□□ -2.89
COPB1-212ENST00000534771 A0A087WWC5 75 aa-3□□□□□ -2.89
COPB1-212ENST00000534771 LINC01549A6NIU2 74 aa-3.01□□□□□ -2.89
COPB1-212ENST00000534771 H3BSH0 61 aa-3.02□□□□□ -2.89
COPB1-212ENST00000534771 PLNP26678 52 aa-3.03□□□□□ -2.89
COPB1-212ENST00000534771 ABCA10Q8WWZ4 1543 aa-3.03□□□□□ -2.9
COPB1-212ENST00000534771 RPL39P62891 51 aaKnown RBP-3.05□□□□□ -2.9
COPB1-212ENST00000534771 HILPDAQ9Y5L2 63 aa-3.05□□□□□ -2.9
COPB1-212ENST00000534771 SAMD9LQ8IVG5 1584 aa-3.06□□□□□ -2.9
COPB1-212ENST00000534771 UGGT2Q9NYU1 1516 aa-3.06□□□□□ -2.9
COPB1-212ENST00000534771 C18orf32Q8TCD1 76 aa-3.09□□□□□ -2.9
COPB1-212ENST00000534771 S100A13Q99584 98 aa-3.09□□□□□ -2.9
COPB1-212ENST00000534771 GNG13Q9P2W3 67 aa-3.1□□□□□ -2.91
COPB1-212ENST00000534771 CPS1P31327 1500 aa-3.1□□□□□ -2.91
COPB1-212ENST00000534771 MROH2BQ7Z745 1585 aa-3.11□□□□□ -2.91
COPB1-212ENST00000534771 RPL39LQ96EH5 51 aaKnown RBP-3.11□□□□□ -2.91
COPB1-212ENST00000534771 PRCDQ00LT1 54 aa-3.16□□□□□ -2.92
COPB1-212ENST00000534771 EFCAB5A4FU69 1503 aa-3.17□□□□□ -2.92
COPB1-212ENST00000534771 FANCD2Q9BXW9 1451 aa-3.18□□□□□ -2.92
COPB1-212ENST00000534771 TMEM167AQ8TBQ9 72 aa-3.19□□□□□ -2.92
COPB1-212ENST00000534771 K7EIM0 57 aa-3.21□□□□□ -2.92
COPB1-212ENST00000534771 Q9Y3F1 56 aa-3.21□□□□□ -2.92
COPB1-212ENST00000534771 IQGAP2Q13576 1575 aa-3.23□□□□□ -2.93
COPB1-212ENST00000534771 COX14Q96I36 57 aa-3.25□□□□□ -2.93
COPB1-212ENST00000534771 DEFB108BQ8NET1 73 aa-3.26□□□□□ -2.93
COPB1-212ENST00000534771 SMCO4Q9NRQ5 59 aa-3.27□□□□□ -2.93
COPB1-212ENST00000534771 STATHP02808 62 aa-3.29□□□□□ -2.94
COPB1-212ENST00000534771 CMC2Q9NRP2 79 aa-3.31□□□□□ -2.94
COPB1-212ENST00000534771 ARHGAP5-AS1Q96IT6 56 aa-3.32□□□□□ -2.94
COPB1-212ENST00000534771 DEFB108AA8MXU0 73 aa-3.38□□□□□ -2.95
COPB1-212ENST00000534771 SNRPGP15A8MWD9 76 aa-3.39□□□□□ -2.95
COPB1-212ENST00000534771 GNG2P59768 71 aa-3.45□□□□□ -2.96
COPB1-212ENST00000534771 RPL39P5Q59GN2 51 aa-3.46□□□□□ -2.96
COPB1-212ENST00000534771 SMIM5Q71RC9 77 aa-3.52□□□□□ -2.97
COPB1-212ENST00000534771 GCC2Q8IWJ2 1684 aa-3.53□□□□□ -2.97
COPB1-212ENST00000534771 SNRPGP62308 76 aaKnown RBP-3.57□□□□□ -2.98
COPB1-212ENST00000534771 TOMM5Q8N4H5 51 aa-3.81□□□□□ -3.02
COPB1-212ENST00000534771 SMIM31A0A1B0GVY4 71 aa-3.85□□□□□ -3.03
Retrieved 78 of 20,778 RNA–protein pairs in 342 ms