RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
CSDE1-217ENST00000534699 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 K7ERS5 55 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 MT1EP04732 61 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
CSDE1-217ENST00000534699 ROMO1P60602 79 aa3.87□□□□□ -1.79
CSDE1-217ENST00000534699 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
CSDE1-217ENST00000534699 SPINT4Q6UDR6 99 aa3.85□□□□□ -1.79
CSDE1-217ENST00000534699 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CSDE1-217ENST00000534699 MT1GP13640 62 aa3.84□□□□□ -1.79
CSDE1-217ENST00000534699 PP632Q6XCG6 107 aa3.84□□□□□ -1.8
CSDE1-217ENST00000534699 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
CSDE1-217ENST00000534699 TNP1P09430 55 aa3.79□□□□□ -1.8
CSDE1-217ENST00000534699 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
CSDE1-217ENST00000534699 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
CSDE1-217ENST00000534699 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
CSDE1-217ENST00000534699 MT1LQ93083 61 aa3.7□□□□□ -1.82
CSDE1-217ENST00000534699 MT1MQ8N339 61 aa3.7□□□□□ -1.82
CSDE1-217ENST00000534699 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
CSDE1-217ENST00000534699 LCE3AQ5TA76 89 aa3.65□□□□□ -1.82
CSDE1-217ENST00000534699 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
CSDE1-217ENST00000534699 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
CSDE1-217ENST00000534699 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
CSDE1-217ENST00000534699 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
CSDE1-217ENST00000534699 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
CSDE1-217ENST00000534699 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
CSDE1-217ENST00000534699 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CSDE1-217ENST00000534699 MT4P47944 62 aa3.47□□□□□ -1.85
CSDE1-217ENST00000534699 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CSDE1-217ENST00000534699 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
CSDE1-217ENST00000534699 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
CSDE1-217ENST00000534699 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-217ENST00000534699 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CSDE1-217ENST00000534699 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
CSDE1-217ENST00000534699 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
CSDE1-217ENST00000534699 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
CSDE1-217ENST00000534699 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
CSDE1-217ENST00000534699 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
CSDE1-217ENST00000534699 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
CSDE1-217ENST00000534699 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.88
CSDE1-217ENST00000534699 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
CSDE1-217ENST00000534699 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
CSDE1-217ENST00000534699 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
CSDE1-217ENST00000534699 AHNAK2Q8IVF2 5795 aa3.28□□□□□ -1.88
CSDE1-217ENST00000534699 MT1AP04731 61 aa3.21□□□□□ -1.9
CSDE1-217ENST00000534699 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CSDE1-217ENST00000534699 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
CSDE1-217ENST00000534699 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
CSDE1-217ENST00000534699 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
CSDE1-217ENST00000534699 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
CSDE1-217ENST00000534699 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
CSDE1-217ENST00000534699 KRTAP5-8O75690 187 aa2.96□□□□□ -1.93
CSDE1-217ENST00000534699 MT3P25713 68 aa2.96□□□□□ -1.94
CSDE1-217ENST00000534699 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CSDE1-217ENST00000534699 INE1O15225 51 aa2.9□□□□□ -1.94
CSDE1-217ENST00000534699 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
CSDE1-217ENST00000534699 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
CSDE1-217ENST00000534699 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
CSDE1-217ENST00000534699 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
CSDE1-217ENST00000534699 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
CSDE1-217ENST00000534699 LCE1CQ5T751 118 aa2.55□□□□□ -2
CSDE1-217ENST00000534699 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
CSDE1-217ENST00000534699 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
CSDE1-217ENST00000534699 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
CSDE1-217ENST00000534699 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CSDE1-217ENST00000534699 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-217ENST00000534699 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CSDE1-217ENST00000534699 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CSDE1-217ENST00000534699 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CSDE1-217ENST00000534699 PRM1P04553 51 aa1.99□□□□□ -2.09
CSDE1-217ENST00000534699 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CSDE1-217ENST00000534699 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
CSDE1-217ENST00000534699 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CSDE1-217ENST00000534699 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CSDE1-217ENST00000534699 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms