RNA–Protein interactions for RNA: ENST00000534286.5

SORL1-212, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-212ENST00000534286 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
SORL1-212ENST00000534286 KRTAP9-6A0A140TA67 174 aa2.88□□□□□ -1.95
SORL1-212ENST00000534286 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
SORL1-212ENST00000534286 LCE5AQ5TCM9 118 aa2.88□□□□□ -1.95
SORL1-212ENST00000534286 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
SORL1-212ENST00000534286 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
SORL1-212ENST00000534286 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
SORL1-212ENST00000534286 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
SORL1-212ENST00000534286 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
SORL1-212ENST00000534286 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
SORL1-212ENST00000534286 KRTAP9-2Q9BYQ4 174 aa2.7□□□□□ -1.98
SORL1-212ENST00000534286 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
SORL1-212ENST00000534286 MT1LQ93083 61 aa2.67□□□□□ -1.98
SORL1-212ENST00000534286 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
SORL1-212ENST00000534286 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
SORL1-212ENST00000534286 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
SORL1-212ENST00000534286 PRM1P04553 51 aa2.65□□□□□ -1.98
SORL1-212ENST00000534286 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
SORL1-212ENST00000534286 MT1EP04732 61 aa2.64□□□□□ -1.99
SORL1-212ENST00000534286 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
SORL1-212ENST00000534286 MT1GP13640 62 aa2.61□□□□□ -1.99
SORL1-212ENST00000534286 LCE3EQ5T5B0 92 aa2.59□□□□□ -2
SORL1-212ENST00000534286 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
SORL1-212ENST00000534286 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
SORL1-212ENST00000534286 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
SORL1-212ENST00000534286 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
SORL1-212ENST00000534286 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
SORL1-212ENST00000534286 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
SORL1-212ENST00000534286 LCE3BQ5TA77 95 aa2.47□□□□□ -2.01
SORL1-212ENST00000534286 MT1MQ8N339 61 aa2.47□□□□□ -2.01
SORL1-212ENST00000534286 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
SORL1-212ENST00000534286 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
SORL1-212ENST00000534286 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
SORL1-212ENST00000534286 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
SORL1-212ENST00000534286 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
SORL1-212ENST00000534286 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
SORL1-212ENST00000534286 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SORL1-212ENST00000534286 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
SORL1-212ENST00000534286 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.33□□□□□ -2.04
SORL1-212ENST00000534286 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
SORL1-212ENST00000534286 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.05
SORL1-212ENST00000534286 MT3P25713 68 aa2.27□□□□□ -2.05
SORL1-212ENST00000534286 SPRR2EP22531 72 aa2.24□□□□□ -2.05
SORL1-212ENST00000534286 SPRR2BP35325 72 aa2.24□□□□□ -2.05
SORL1-212ENST00000534286 SPRR2AP35326 72 aa2.24□□□□□ -2.05
SORL1-212ENST00000534286 MT1AP04731 61 aa2.22□□□□□ -2.05
SORL1-212ENST00000534286 SPRR2DP22532 72 aa2.15□□□□□ -2.06
SORL1-212ENST00000534286 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SORL1-212ENST00000534286 NEBP20929 6669 aa2.08□□□□□ -2.08
SORL1-212ENST00000534286 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
SORL1-212ENST00000534286 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
SORL1-212ENST00000534286 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
SORL1-212ENST00000534286 MT4P47944 62 aa1.96□□□□□ -2.1
SORL1-212ENST00000534286 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
SORL1-212ENST00000534286 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SORL1-212ENST00000534286 KRTAP4-6Q9BYQ5 205 aa1.88□□□□□ -2.11
SORL1-212ENST00000534286 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
SORL1-212ENST00000534286 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
SORL1-212ENST00000534286 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
SORL1-212ENST00000534286 KRTAP5-3Q6L8H2 238 aa1.8□□□□□ -2.12
SORL1-212ENST00000534286 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
SORL1-212ENST00000534286 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
SORL1-212ENST00000534286 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SORL1-212ENST00000534286 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
SORL1-212ENST00000534286 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SORL1-212ENST00000534286 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
SORL1-212ENST00000534286 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
SORL1-212ENST00000534286 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SORL1-212ENST00000534286 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
SORL1-212ENST00000534286 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
SORL1-212ENST00000534286 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
SORL1-212ENST00000534286 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
SORL1-212ENST00000534286 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SORL1-212ENST00000534286 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SORL1-212ENST00000534286 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
SORL1-212ENST00000534286 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
SORL1-212ENST00000534286 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 5 ms