RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 A0A1B0GU69 56 aa5.71□□□□□ -1.5
CAPRIN1-216ENST00000534042 KRTAP5-7Q6L8G8 165 aa5.68□□□□□ -1.5
CAPRIN1-216ENST00000534042 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
CAPRIN1-216ENST00000534042 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
CAPRIN1-216ENST00000534042 COX7CP15954 63 aa5.65□□□□□ -1.5
CAPRIN1-216ENST00000534042 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
CAPRIN1-216ENST00000534042 H7BZZ5 65 aa5.63□□□□□ -1.51
CAPRIN1-216ENST00000534042 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
CAPRIN1-216ENST00000534042 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
CAPRIN1-216ENST00000534042 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
CAPRIN1-216ENST00000534042 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
CAPRIN1-216ENST00000534042 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
CAPRIN1-216ENST00000534042 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
CAPRIN1-216ENST00000534042 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CAPRIN1-216ENST00000534042 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
CAPRIN1-216ENST00000534042 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
CAPRIN1-216ENST00000534042 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CAPRIN1-216ENST00000534042 ANAPC13Q9BS18 74 aa5.28□□□□□ -1.56
CAPRIN1-216ENST00000534042 UQCR11O14957 56 aa5.25□□□□□ -1.57
CAPRIN1-216ENST00000534042 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
CAPRIN1-216ENST00000534042 H3BS24 57 aa5.21□□□□□ -1.58
CAPRIN1-216ENST00000534042 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CAPRIN1-216ENST00000534042 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
CAPRIN1-216ENST00000534042 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
CAPRIN1-216ENST00000534042 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
CAPRIN1-216ENST00000534042 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
CAPRIN1-216ENST00000534042 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
CAPRIN1-216ENST00000534042 K7ERS5 55 aa5.09□□□□□ -1.59
CAPRIN1-216ENST00000534042 MT1AP04731 61 aa5.09□□□□□ -1.59
CAPRIN1-216ENST00000534042 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
CAPRIN1-216ENST00000534042 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
CAPRIN1-216ENST00000534042 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
CAPRIN1-216ENST00000534042 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CAPRIN1-216ENST00000534042 TMEM258P61165 79 aa4.96□□□□□ -1.62
CAPRIN1-216ENST00000534042 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
CAPRIN1-216ENST00000534042 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
CAPRIN1-216ENST00000534042 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
CAPRIN1-216ENST00000534042 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
CAPRIN1-216ENST00000534042 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
CAPRIN1-216ENST00000534042 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
CAPRIN1-216ENST00000534042 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
CAPRIN1-216ENST00000534042 PSPHP1O15172 72 aa4.83□□□□□ -1.64
CAPRIN1-216ENST00000534042 V9GYY9 64 aa4.79□□□□□ -1.64
CAPRIN1-216ENST00000534042 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
CAPRIN1-216ENST00000534042 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
CAPRIN1-216ENST00000534042 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CAPRIN1-216ENST00000534042 Q1T7F1 81 aa4.75□□□□□ -1.65
CAPRIN1-216ENST00000534042 MT3P25713 68 aa4.67□□□□□ -1.66
CAPRIN1-216ENST00000534042 ROMO1P60602 79 aa4.66□□□□□ -1.66
CAPRIN1-216ENST00000534042 A6NED7 52 aa4.65□□□□□ -1.67
CAPRIN1-216ENST00000534042 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
CAPRIN1-216ENST00000534042 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CAPRIN1-216ENST00000534042 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
CAPRIN1-216ENST00000534042 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
CAPRIN1-216ENST00000534042 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CAPRIN1-216ENST00000534042 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CAPRIN1-216ENST00000534042 PCP4P48539 62 aa3.78□□□□□ -1.8
CAPRIN1-216ENST00000534042 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
CAPRIN1-216ENST00000534042 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
CAPRIN1-216ENST00000534042 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
CAPRIN1-216ENST00000534042 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
CAPRIN1-216ENST00000534042 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
CAPRIN1-216ENST00000534042 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
CAPRIN1-216ENST00000534042 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
CAPRIN1-216ENST00000534042 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CAPRIN1-216ENST00000534042 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
CAPRIN1-216ENST00000534042 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
CAPRIN1-216ENST00000534042 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CAPRIN1-216ENST00000534042 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
CAPRIN1-216ENST00000534042 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CAPRIN1-216ENST00000534042 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
CAPRIN1-216ENST00000534042 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
CAPRIN1-216ENST00000534042 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
CAPRIN1-216ENST00000534042 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
CAPRIN1-216ENST00000534042 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CAPRIN1-216ENST00000534042 PRM1P04553 51 aa2.36□□□□□ -2.03
CAPRIN1-216ENST00000534042 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
CAPRIN1-216ENST00000534042 INE1O15225 51 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms