RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 SPRR2DP22532 72 aa5.35□□□□□ -1.55
SF3B2-214ENST00000533595 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
SF3B2-214ENST00000533595 ROMO1P60602 79 aa5.28□□□□□ -1.56
SF3B2-214ENST00000533595 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
SF3B2-214ENST00000533595 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
SF3B2-214ENST00000533595 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
SF3B2-214ENST00000533595 MT1GP13640 62 aa5.21□□□□□ -1.58
SF3B2-214ENST00000533595 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
SF3B2-214ENST00000533595 MT1LQ93083 61 aa5.21□□□□□ -1.58
SF3B2-214ENST00000533595 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
SF3B2-214ENST00000533595 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
SF3B2-214ENST00000533595 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
SF3B2-214ENST00000533595 MT1MQ8N339 61 aa5.11□□□□□ -1.59
SF3B2-214ENST00000533595 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
SF3B2-214ENST00000533595 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
SF3B2-214ENST00000533595 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
SF3B2-214ENST00000533595 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SF3B2-214ENST00000533595 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
SF3B2-214ENST00000533595 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
SF3B2-214ENST00000533595 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
SF3B2-214ENST00000533595 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
SF3B2-214ENST00000533595 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
SF3B2-214ENST00000533595 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
SF3B2-214ENST00000533595 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SF3B2-214ENST00000533595 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
SF3B2-214ENST00000533595 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
SF3B2-214ENST00000533595 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
SF3B2-214ENST00000533595 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
SF3B2-214ENST00000533595 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
SF3B2-214ENST00000533595 MT4P47944 62 aa4.69□□□□□ -1.66
SF3B2-214ENST00000533595 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
SF3B2-214ENST00000533595 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
SF3B2-214ENST00000533595 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
SF3B2-214ENST00000533595 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
SF3B2-214ENST00000533595 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
SF3B2-214ENST00000533595 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
SF3B2-214ENST00000533595 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SF3B2-214ENST00000533595 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
SF3B2-214ENST00000533595 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
SF3B2-214ENST00000533595 MT1AP04731 61 aa4.44□□□□□ -1.7
SF3B2-214ENST00000533595 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
SF3B2-214ENST00000533595 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
SF3B2-214ENST00000533595 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
SF3B2-214ENST00000533595 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
SF3B2-214ENST00000533595 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SF3B2-214ENST00000533595 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
SF3B2-214ENST00000533595 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SF3B2-214ENST00000533595 MT3P25713 68 aa4.05□□□□□ -1.76
SF3B2-214ENST00000533595 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
SF3B2-214ENST00000533595 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
SF3B2-214ENST00000533595 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
SF3B2-214ENST00000533595 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
SF3B2-214ENST00000533595 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
SF3B2-214ENST00000533595 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SF3B2-214ENST00000533595 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
SF3B2-214ENST00000533595 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SF3B2-214ENST00000533595 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
SF3B2-214ENST00000533595 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SF3B2-214ENST00000533595 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
SF3B2-214ENST00000533595 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
SF3B2-214ENST00000533595 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SF3B2-214ENST00000533595 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
SF3B2-214ENST00000533595 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SF3B2-214ENST00000533595 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
SF3B2-214ENST00000533595 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
SF3B2-214ENST00000533595 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SF3B2-214ENST00000533595 H3BS24 57 aa3.05□□□□□ -1.92
SF3B2-214ENST00000533595 INE1O15225 51 aa3.05□□□□□ -1.92
SF3B2-214ENST00000533595 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
SF3B2-214ENST00000533595 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
SF3B2-214ENST00000533595 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
SF3B2-214ENST00000533595 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SF3B2-214ENST00000533595 PRM1P04553 51 aa2.71□□□□□ -1.98
SF3B2-214ENST00000533595 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SF3B2-214ENST00000533595 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SF3B2-214ENST00000533595 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SF3B2-214ENST00000533595 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SF3B2-214ENST00000533595 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 354.5 ms