RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
SDHD-213ENST00000532699 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
SDHD-213ENST00000532699 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SDHD-213ENST00000532699 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
SDHD-213ENST00000532699 H7BZZ5 65 aa4.37□□□□□ -1.71
SDHD-213ENST00000532699 SEC61GP60059 68 aa4.37□□□□□ -1.71
SDHD-213ENST00000532699 A8MU10 97 aa4.36□□□□□ -1.71
SDHD-213ENST00000532699 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
SDHD-213ENST00000532699 COX7CP15954 63 aa4.35□□□□□ -1.71
SDHD-213ENST00000532699 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
SDHD-213ENST00000532699 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
SDHD-213ENST00000532699 A0A1B0GU69 56 aa4.24□□□□□ -1.73
SDHD-213ENST00000532699 TNP1P09430 55 aa4.23□□□□□ -1.73
SDHD-213ENST00000532699 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
SDHD-213ENST00000532699 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SDHD-213ENST00000532699 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
SDHD-213ENST00000532699 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
SDHD-213ENST00000532699 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
SDHD-213ENST00000532699 PCP4P48539 62 aa4.11□□□□□ -1.75
SDHD-213ENST00000532699 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
SDHD-213ENST00000532699 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
SDHD-213ENST00000532699 ANAPC13Q9BS18 74 aa4.06□□□□□ -1.76
SDHD-213ENST00000532699 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
SDHD-213ENST00000532699 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
SDHD-213ENST00000532699 PRR15LQ9BU68 103 aa4□□□□□ -1.77
SDHD-213ENST00000532699 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
SDHD-213ENST00000532699 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
SDHD-213ENST00000532699 UQCR11O14957 56 aa3.92□□□□□ -1.78
SDHD-213ENST00000532699 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SDHD-213ENST00000532699 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
SDHD-213ENST00000532699 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
SDHD-213ENST00000532699 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
SDHD-213ENST00000532699 KRTAP5-2Q701N4 177 aa3.83□□□□□ -1.8
SDHD-213ENST00000532699 TMEM258P61165 79 aa3.82□□□□□ -1.8
SDHD-213ENST00000532699 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
SDHD-213ENST00000532699 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
SDHD-213ENST00000532699 MT1AP04731 61 aa3.77□□□□□ -1.81
SDHD-213ENST00000532699 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
SDHD-213ENST00000532699 PSPHP1O15172 72 aa3.71□□□□□ -1.82
SDHD-213ENST00000532699 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
SDHD-213ENST00000532699 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SDHD-213ENST00000532699 K7ERS5 55 aa3.66□□□□□ -1.82
SDHD-213ENST00000532699 Q1T7F1 81 aa3.65□□□□□ -1.83
SDHD-213ENST00000532699 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.83
SDHD-213ENST00000532699 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
SDHD-213ENST00000532699 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
SDHD-213ENST00000532699 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
SDHD-213ENST00000532699 V9GYY9 64 aa3.58□□□□□ -1.84
SDHD-213ENST00000532699 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
SDHD-213ENST00000532699 A6NED7 52 aa3.51□□□□□ -1.85
SDHD-213ENST00000532699 ROMO1P60602 79 aa3.51□□□□□ -1.85
SDHD-213ENST00000532699 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
SDHD-213ENST00000532699 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SDHD-213ENST00000532699 MT3P25713 68 aa3.4□□□□□ -1.87
SDHD-213ENST00000532699 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
SDHD-213ENST00000532699 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
SDHD-213ENST00000532699 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
SDHD-213ENST00000532699 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SDHD-213ENST00000532699 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
SDHD-213ENST00000532699 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
SDHD-213ENST00000532699 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SDHD-213ENST00000532699 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
SDHD-213ENST00000532699 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SDHD-213ENST00000532699 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SDHD-213ENST00000532699 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
SDHD-213ENST00000532699 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SDHD-213ENST00000532699 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
SDHD-213ENST00000532699 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SDHD-213ENST00000532699 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SDHD-213ENST00000532699 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
SDHD-213ENST00000532699 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
SDHD-213ENST00000532699 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
SDHD-213ENST00000532699 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SDHD-213ENST00000532699 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SDHD-213ENST00000532699 INE1O15225 51 aa2.09□□□□□ -2.07
SDHD-213ENST00000532699 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SDHD-213ENST00000532699 PRM1P04553 51 aa1.82□□□□□ -2.12
SDHD-213ENST00000532699 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 3103.3 ms