RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
CAPRIN1-210ENST00000531668 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
CAPRIN1-210ENST00000531668 MT1GP13640 62 aa6.11□□□□□ -1.43
CAPRIN1-210ENST00000531668 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
CAPRIN1-210ENST00000531668 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
CAPRIN1-210ENST00000531668 MT1LQ93083 61 aa6.08□□□□□ -1.44
CAPRIN1-210ENST00000531668 H3BS24 57 aa6.04□□□□□ -1.44
CAPRIN1-210ENST00000531668 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
CAPRIN1-210ENST00000531668 MT1MQ8N339 61 aa6.01□□□□□ -1.45
CAPRIN1-210ENST00000531668 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
CAPRIN1-210ENST00000531668 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
CAPRIN1-210ENST00000531668 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
CAPRIN1-210ENST00000531668 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
CAPRIN1-210ENST00000531668 ROMO1P60602 79 aa5.89□□□□□ -1.47
CAPRIN1-210ENST00000531668 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
CAPRIN1-210ENST00000531668 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
CAPRIN1-210ENST00000531668 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
CAPRIN1-210ENST00000531668 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
CAPRIN1-210ENST00000531668 MT4P47944 62 aa5.66□□□□□ -1.5
CAPRIN1-210ENST00000531668 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
CAPRIN1-210ENST00000531668 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
CAPRIN1-210ENST00000531668 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
CAPRIN1-210ENST00000531668 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
CAPRIN1-210ENST00000531668 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CAPRIN1-210ENST00000531668 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
CAPRIN1-210ENST00000531668 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
CAPRIN1-210ENST00000531668 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
CAPRIN1-210ENST00000531668 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
CAPRIN1-210ENST00000531668 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
CAPRIN1-210ENST00000531668 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
CAPRIN1-210ENST00000531668 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
CAPRIN1-210ENST00000531668 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
CAPRIN1-210ENST00000531668 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
CAPRIN1-210ENST00000531668 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
CAPRIN1-210ENST00000531668 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
CAPRIN1-210ENST00000531668 MT1AP04731 61 aa5.18□□□□□ -1.58
CAPRIN1-210ENST00000531668 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
CAPRIN1-210ENST00000531668 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
CAPRIN1-210ENST00000531668 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
CAPRIN1-210ENST00000531668 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
CAPRIN1-210ENST00000531668 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
CAPRIN1-210ENST00000531668 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
CAPRIN1-210ENST00000531668 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
CAPRIN1-210ENST00000531668 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
CAPRIN1-210ENST00000531668 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
CAPRIN1-210ENST00000531668 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CAPRIN1-210ENST00000531668 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
CAPRIN1-210ENST00000531668 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
CAPRIN1-210ENST00000531668 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
CAPRIN1-210ENST00000531668 MT3P25713 68 aa4.74□□□□□ -1.65
CAPRIN1-210ENST00000531668 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
CAPRIN1-210ENST00000531668 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
CAPRIN1-210ENST00000531668 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
CAPRIN1-210ENST00000531668 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
CAPRIN1-210ENST00000531668 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CAPRIN1-210ENST00000531668 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
CAPRIN1-210ENST00000531668 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CAPRIN1-210ENST00000531668 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
CAPRIN1-210ENST00000531668 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
CAPRIN1-210ENST00000531668 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
CAPRIN1-210ENST00000531668 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
CAPRIN1-210ENST00000531668 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
CAPRIN1-210ENST00000531668 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
CAPRIN1-210ENST00000531668 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
CAPRIN1-210ENST00000531668 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
CAPRIN1-210ENST00000531668 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
CAPRIN1-210ENST00000531668 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
CAPRIN1-210ENST00000531668 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
CAPRIN1-210ENST00000531668 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
CAPRIN1-210ENST00000531668 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CAPRIN1-210ENST00000531668 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
CAPRIN1-210ENST00000531668 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
CAPRIN1-210ENST00000531668 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
CAPRIN1-210ENST00000531668 PRM1P04553 51 aa3.05□□□□□ -1.92
CAPRIN1-210ENST00000531668 INE1O15225 51 aa2.96□□□□□ -1.94
CAPRIN1-210ENST00000531668 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
CAPRIN1-210ENST00000531668 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CAPRIN1-210ENST00000531668 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms