RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 LCE3BQ5TA77 95 aa9.41□□□□□ -0.9
PICALM-215ENST00000531558 A6NED7 52 aa9.33□□□□□ -0.92
PICALM-215ENST00000531558 MT1GP13640 62 aa9.25□□□□□ -0.93
PICALM-215ENST00000531558 KRTAP25-1Q3LHN0 102 aa9.23□□□□□ -0.93
PICALM-215ENST00000531558 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
PICALM-215ENST00000531558 MT1LQ93083 61 aa9.22□□□□□ -0.93
PICALM-215ENST00000531558 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
PICALM-215ENST00000531558 PP632Q6XCG6 107 aa9.17□□□□□ -0.94
PICALM-215ENST00000531558 KRTAP12-3P60328 96 aa9.11□□□□□ -0.95
PICALM-215ENST00000531558 MT1MQ8N339 61 aa9.11□□□□□ -0.95
PICALM-215ENST00000531558 DSTQ03001 7570 aaKnown RBP9.09□□□□□ -0.95
PICALM-215ENST00000531558 H3BS24 57 aa8.98□□□□□ -0.97
PICALM-215ENST00000531558 CDC42SE1Q9NRR8 79 aa8.97□□□□□ -0.97
PICALM-215ENST00000531558 KRTAP23-1A1A580 65 aa8.9□□□□□ -0.98
PICALM-215ENST00000531558 KRTAP4-3Q9BYR4 195 aa8.87□□□□□ -0.99
PICALM-215ENST00000531558 ROMO1P60602 79 aa8.84□□□□□ -0.99
PICALM-215ENST00000531558 KRTAP4-7Q9BYR0 210 aa8.78□□□□□ -1
PICALM-215ENST00000531558 KRTAP4-9Q9BYQ8 210 aa8.66□□□□□ -1.02
PICALM-215ENST00000531558 KRTAP19-4Q3LI73 84 aa8.6□□□□□ -1.03
PICALM-215ENST00000531558 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
PICALM-215ENST00000531558 LCE4AQ5TA78 99 aa8.59□□□□□ -1.03
PICALM-215ENST00000531558 LCE1DQ5T752 114 aa8.51□□□□□ -1.05
PICALM-215ENST00000531558 KRTAP5-4Q6L8H1 288 aa8.51□□□□□ -1.05
PICALM-215ENST00000531558 HMCN1Q96RW7 5635 aa8.48□□□□□ -1.05
PICALM-215ENST00000531558 MT4P47944 62 aa8.45□□□□□ -1.06
PICALM-215ENST00000531558 LCE3CQ5T5A8 94 aa8.41□□□□□ -1.06
PICALM-215ENST00000531558 KRTAP4-12Q9BQ66 201 aa8.41□□□□□ -1.06
PICALM-215ENST00000531558 KRTAP5-5Q701N2 237 aaPredicted RBP8.34□□□□□ -1.07
PICALM-215ENST00000531558 BRK1Q8WUW1 75 aa8.33□□□□□ -1.08
PICALM-215ENST00000531558 GPR98Q8WXG9 6306 aa8.25□□□□□ -1.09
PICALM-215ENST00000531558 KRTAP9-9Q9BYP9 154 aa8.07□□□□□ -1.12
PICALM-215ENST00000531558 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
PICALM-215ENST00000531558 AHNAK2Q8IVF2 5795 aa8.06□□□□□ -1.12
PICALM-215ENST00000531558 KRTAP12-4P60329 112 aa8.02□□□□□ -1.13
PICALM-215ENST00000531558 KRTAP20-2Q3LI61 65 aa8.01□□□□□ -1.13
PICALM-215ENST00000531558 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
PICALM-215ENST00000531558 SYNE1Q8NF91 8797 aaKnown RBP7.97□□□□□ -1.13
PICALM-215ENST00000531558 KRTAP9-6A8MVA2 160 aa7.93□□□□□ -1.14
PICALM-215ENST00000531558 MT1AP04731 61 aa7.85□□□□□ -1.15
PICALM-215ENST00000531558 PMAIP1Q13794 54 aa7.83□□□□□ -1.16
PICALM-215ENST00000531558 KRTAP6-1Q3LI64 71 aa7.78□□□□□ -1.16
PICALM-215ENST00000531558 KRTAP5-3Q6L8H2 238 aa7.76□□□□□ -1.17
PICALM-215ENST00000531558 KRTAP5-10Q6L8G5 202 aa7.75□□□□□ -1.17
PICALM-215ENST00000531558 KRTAP5-2Q701N4 177 aa7.52□□□□□ -1.21
PICALM-215ENST00000531558 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
PICALM-215ENST00000531558 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
PICALM-215ENST00000531558 KRTAP5-7Q6L8G8 165 aa7.4□□□□□ -1.22
PICALM-215ENST00000531558 KRTAP6-2Q3LI66 62 aa7.37□□□□□ -1.23
PICALM-215ENST00000531558 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
PICALM-215ENST00000531558 KRTAP4-2Q9BYR5 136 aa7.21□□□□□ -1.26
PICALM-215ENST00000531558 MT3P25713 68 aa7.16□□□□□ -1.26
PICALM-215ENST00000531558 KTN1-AS1Q86SY8 53 aa7.12□□□□□ -1.27
PICALM-215ENST00000531558 KRTAP5-8O75690 187 aa6.98□□□□□ -1.29
PICALM-215ENST00000531558 OBSCNQ5VST9 7968 aa6.89□□□□□ -1.31
PICALM-215ENST00000531558 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
PICALM-215ENST00000531558 KRTAP5-1Q6L8H4 278 aa6.67□□□□□ -1.34
PICALM-215ENST00000531558 MUC5ACP98088 5654 aa6.66□□□□□ -1.34
PICALM-215ENST00000531558 MUC5BQ9HC84 5762 aaPredicted RBP6.61□□□□□ -1.35
PICALM-215ENST00000531558 AHNAKQ09666 5890 aaKnown RBP6.58□□□□□ -1.36
PICALM-215ENST00000531558 LCE1EQ5T753 118 aa6.5□□□□□ -1.37
PICALM-215ENST00000531558 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
PICALM-215ENST00000531558 LCE3DQ9BYE3 92 aa6.12□□□□□ -1.43
PICALM-215ENST00000531558 LCE1BQ5T7P3 118 aa6.09□□□□□ -1.43
PICALM-215ENST00000531558 LCE1CQ5T751 118 aa6.04□□□□□ -1.44
PICALM-215ENST00000531558 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
PICALM-215ENST00000531558 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
PICALM-215ENST00000531558 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.54□□□□□ -1.52
PICALM-215ENST00000531558 KRTAP5-11Q6L8G4 156 aa5.45□□□□□ -1.54
PICALM-215ENST00000531558 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
PICALM-215ENST00000531558 LCE1FQ5T754 118 aa5.21□□□□□ -1.58
PICALM-215ENST00000531558 KRTAP21-2Q3LI59 83 aa5.12□□□□□ -1.59
PICALM-215ENST00000531558 PHGR1C9JFL3 82 aa4.69□□□□□ -1.66
PICALM-215ENST00000531558 KRTAP4-4Q9BYR3 166 aa4.63□□□□□ -1.67
PICALM-215ENST00000531558 PRM1P04553 51 aa4.54□□□□□ -1.68
PICALM-215ENST00000531558 INE1O15225 51 aa4.28□□□□□ -1.72
PICALM-215ENST00000531558 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
PICALM-215ENST00000531558 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
PICALM-215ENST00000531558 MUC16Q8WXI7 14507 aa3.07□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms