RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 COX7CP15954 63 aa4.06□□□□□ -1.76
FOXRED1-211ENST00000531257 MT1MQ8N339 61 aa4.06□□□□□ -1.76
FOXRED1-211ENST00000531257 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
FOXRED1-211ENST00000531257 MT1LQ93083 61 aa4.04□□□□□ -1.76
FOXRED1-211ENST00000531257 A0A1B0GU69 56 aa4.03□□□□□ -1.76
FOXRED1-211ENST00000531257 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
FOXRED1-211ENST00000531257 A8MU10 97 aa4.02□□□□□ -1.77
FOXRED1-211ENST00000531257 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
FOXRED1-211ENST00000531257 H7BZZ5 65 aa4□□□□□ -1.77
FOXRED1-211ENST00000531257 TMEM258P61165 79 aa4□□□□□ -1.77
FOXRED1-211ENST00000531257 LCE3AQ5TA76 89 aa4□□□□□ -1.77
FOXRED1-211ENST00000531257 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
FOXRED1-211ENST00000531257 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
FOXRED1-211ENST00000531257 TNP1P09430 55 aa3.98□□□□□ -1.77
FOXRED1-211ENST00000531257 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
FOXRED1-211ENST00000531257 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
FOXRED1-211ENST00000531257 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
FOXRED1-211ENST00000531257 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
FOXRED1-211ENST00000531257 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
FOXRED1-211ENST00000531257 PRR15LQ9BU68 103 aa3.85□□□□□ -1.79
FOXRED1-211ENST00000531257 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
FOXRED1-211ENST00000531257 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
FOXRED1-211ENST00000531257 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
FOXRED1-211ENST00000531257 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
FOXRED1-211ENST00000531257 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
FOXRED1-211ENST00000531257 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
FOXRED1-211ENST00000531257 UQCR11O14957 56 aa3.71□□□□□ -1.82
FOXRED1-211ENST00000531257 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
FOXRED1-211ENST00000531257 V9GYY9 64 aa3.7□□□□□ -1.82
FOXRED1-211ENST00000531257 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
FOXRED1-211ENST00000531257 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
FOXRED1-211ENST00000531257 Q1T7F1 81 aa3.66□□□□□ -1.82
FOXRED1-211ENST00000531257 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
FOXRED1-211ENST00000531257 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
FOXRED1-211ENST00000531257 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
FOXRED1-211ENST00000531257 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
FOXRED1-211ENST00000531257 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
FOXRED1-211ENST00000531257 K7ERS5 55 aa3.59□□□□□ -1.83
FOXRED1-211ENST00000531257 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
FOXRED1-211ENST00000531257 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
FOXRED1-211ENST00000531257 PSPHP1O15172 72 aa3.5□□□□□ -1.85
FOXRED1-211ENST00000531257 A6NED7 52 aa3.45□□□□□ -1.86
FOXRED1-211ENST00000531257 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
FOXRED1-211ENST00000531257 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
FOXRED1-211ENST00000531257 MT1AP04731 61 aa3.43□□□□□ -1.86
FOXRED1-211ENST00000531257 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
FOXRED1-211ENST00000531257 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
FOXRED1-211ENST00000531257 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
FOXRED1-211ENST00000531257 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
FOXRED1-211ENST00000531257 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
FOXRED1-211ENST00000531257 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
FOXRED1-211ENST00000531257 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
FOXRED1-211ENST00000531257 ROMO1P60602 79 aa3.3□□□□□ -1.88
FOXRED1-211ENST00000531257 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
FOXRED1-211ENST00000531257 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
FOXRED1-211ENST00000531257 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
FOXRED1-211ENST00000531257 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
FOXRED1-211ENST00000531257 MT3P25713 68 aa3.15□□□□□ -1.91
FOXRED1-211ENST00000531257 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
FOXRED1-211ENST00000531257 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
FOXRED1-211ENST00000531257 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
FOXRED1-211ENST00000531257 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
FOXRED1-211ENST00000531257 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
FOXRED1-211ENST00000531257 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
FOXRED1-211ENST00000531257 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
FOXRED1-211ENST00000531257 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
FOXRED1-211ENST00000531257 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
FOXRED1-211ENST00000531257 NDUFAF8A1L188 74 aa2.58□□□□□ -2
FOXRED1-211ENST00000531257 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
FOXRED1-211ENST00000531257 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
FOXRED1-211ENST00000531257 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
FOXRED1-211ENST00000531257 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
FOXRED1-211ENST00000531257 INE1O15225 51 aa2.25□□□□□ -2.05
FOXRED1-211ENST00000531257 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
FOXRED1-211ENST00000531257 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
FOXRED1-211ENST00000531257 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
FOXRED1-211ENST00000531257 PRM1P04553 51 aa1.7□□□□□ -2.14
FOXRED1-211ENST00000531257 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 86.6 ms