RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 A8MU10 97 aa5.43□□□□□ -1.54
CHMP4A-204ENST00000530996 A0A1B0GU69 56 aa5.42□□□□□ -1.54
CHMP4A-204ENST00000530996 PCP4P48539 62 aa5.38□□□□□ -1.55
CHMP4A-204ENST00000530996 COX7CP15954 63 aa5.33□□□□□ -1.56
CHMP4A-204ENST00000530996 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
CHMP4A-204ENST00000530996 H7BZZ5 65 aa5.31□□□□□ -1.56
CHMP4A-204ENST00000530996 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
CHMP4A-204ENST00000530996 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
CHMP4A-204ENST00000530996 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
CHMP4A-204ENST00000530996 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
CHMP4A-204ENST00000530996 KRTAP4-12Q9BQ66 201 aa5.21□□□□□ -1.58
CHMP4A-204ENST00000530996 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
CHMP4A-204ENST00000530996 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
CHMP4A-204ENST00000530996 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
CHMP4A-204ENST00000530996 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
CHMP4A-204ENST00000530996 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
CHMP4A-204ENST00000530996 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
CHMP4A-204ENST00000530996 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
CHMP4A-204ENST00000530996 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
CHMP4A-204ENST00000530996 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
CHMP4A-204ENST00000530996 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-204ENST00000530996 UQCR11O14957 56 aa4.97□□□□□ -1.61
CHMP4A-204ENST00000530996 ATP5EP56381 51 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-204ENST00000530996 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
CHMP4A-204ENST00000530996 K7ERS5 55 aa4.86□□□□□ -1.63
CHMP4A-204ENST00000530996 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
CHMP4A-204ENST00000530996 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
CHMP4A-204ENST00000530996 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
CHMP4A-204ENST00000530996 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
CHMP4A-204ENST00000530996 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
CHMP4A-204ENST00000530996 MT1AP04731 61 aa4.76□□□□□ -1.65
CHMP4A-204ENST00000530996 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
CHMP4A-204ENST00000530996 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
CHMP4A-204ENST00000530996 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-204ENST00000530996 TMEM258P61165 79 aa4.72□□□□□ -1.65
CHMP4A-204ENST00000530996 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
CHMP4A-204ENST00000530996 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
CHMP4A-204ENST00000530996 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
CHMP4A-204ENST00000530996 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
CHMP4A-204ENST00000530996 PSPHP1O15172 72 aa4.62□□□□□ -1.67
CHMP4A-204ENST00000530996 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
CHMP4A-204ENST00000530996 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
CHMP4A-204ENST00000530996 H3BS24 57 aa4.58□□□□□ -1.68
CHMP4A-204ENST00000530996 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
CHMP4A-204ENST00000530996 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
CHMP4A-204ENST00000530996 V9GYY9 64 aa4.54□□□□□ -1.68
CHMP4A-204ENST00000530996 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
CHMP4A-204ENST00000530996 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
CHMP4A-204ENST00000530996 A6NED7 52 aa4.46□□□□□ -1.7
CHMP4A-204ENST00000530996 Q1T7F1 81 aa4.46□□□□□ -1.7
CHMP4A-204ENST00000530996 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
CHMP4A-204ENST00000530996 ROMO1P60602 79 aa4.42□□□□□ -1.7
CHMP4A-204ENST00000530996 MT3P25713 68 aa4.38□□□□□ -1.71
CHMP4A-204ENST00000530996 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
CHMP4A-204ENST00000530996 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
CHMP4A-204ENST00000530996 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
CHMP4A-204ENST00000530996 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
CHMP4A-204ENST00000530996 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
CHMP4A-204ENST00000530996 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CHMP4A-204ENST00000530996 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CHMP4A-204ENST00000530996 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CHMP4A-204ENST00000530996 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
CHMP4A-204ENST00000530996 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CHMP4A-204ENST00000530996 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
CHMP4A-204ENST00000530996 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
CHMP4A-204ENST00000530996 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CHMP4A-204ENST00000530996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CHMP4A-204ENST00000530996 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
CHMP4A-204ENST00000530996 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
CHMP4A-204ENST00000530996 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
CHMP4A-204ENST00000530996 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CHMP4A-204ENST00000530996 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CHMP4A-204ENST00000530996 INE1O15225 51 aa2.82□□□□□ -1.96
CHMP4A-204ENST00000530996 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
CHMP4A-204ENST00000530996 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CHMP4A-204ENST00000530996 PRM1P04553 51 aa2.26□□□□□ -2.05
CHMP4A-204ENST00000530996 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms