RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
PSMC3-208ENST00000530887 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
PSMC3-208ENST00000530887 A0A1B0GU69 56 aa6.24□□□□□ -1.41
PSMC3-208ENST00000530887 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
PSMC3-208ENST00000530887 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
PSMC3-208ENST00000530887 COX7CP15954 63 aa6.17□□□□□ -1.42
PSMC3-208ENST00000530887 H7BZZ5 65 aa6.12□□□□□ -1.43
PSMC3-208ENST00000530887 KRTAP5-3Q6L8H2 238 aa6.12□□□□□ -1.43
PSMC3-208ENST00000530887 A8MU10 97 aa6.11□□□□□ -1.43
PSMC3-208ENST00000530887 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
PSMC3-208ENST00000530887 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
PSMC3-208ENST00000530887 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
PSMC3-208ENST00000530887 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
PSMC3-208ENST00000530887 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
PSMC3-208ENST00000530887 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
PSMC3-208ENST00000530887 H3BS24 57 aa5.97□□□□□ -1.45
PSMC3-208ENST00000530887 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
PSMC3-208ENST00000530887 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
PSMC3-208ENST00000530887 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
PSMC3-208ENST00000530887 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
PSMC3-208ENST00000530887 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
PSMC3-208ENST00000530887 LINC01558Q9Y6Z2 57 aa5.81□□□□□ -1.48
PSMC3-208ENST00000530887 UQCR11O14957 56 aa5.8□□□□□ -1.48
PSMC3-208ENST00000530887 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
PSMC3-208ENST00000530887 CCDC179H3BU77 68 aa5.7□□□□□ -1.5
PSMC3-208ENST00000530887 K7ERS5 55 aa5.68□□□□□ -1.5
PSMC3-208ENST00000530887 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
PSMC3-208ENST00000530887 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
PSMC3-208ENST00000530887 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
PSMC3-208ENST00000530887 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
PSMC3-208ENST00000530887 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
PSMC3-208ENST00000530887 TMEM258P61165 79 aa5.57□□□□□ -1.52
PSMC3-208ENST00000530887 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
PSMC3-208ENST00000530887 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
PSMC3-208ENST00000530887 MT1AP04731 61 aa5.51□□□□□ -1.53
PSMC3-208ENST00000530887 PCP4P48539 62 aa5.45□□□□□ -1.54
PSMC3-208ENST00000530887 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
PSMC3-208ENST00000530887 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
PSMC3-208ENST00000530887 V9GYY9 64 aa5.36□□□□□ -1.55
PSMC3-208ENST00000530887 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
PSMC3-208ENST00000530887 MUC5BQ9HC84 5762 aaPredicted RBP5.33□□□□□ -1.56
PSMC3-208ENST00000530887 MUC5ACP98088 5654 aa5.32□□□□□ -1.56
PSMC3-208ENST00000530887 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
PSMC3-208ENST00000530887 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
PSMC3-208ENST00000530887 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
PSMC3-208ENST00000530887 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
PSMC3-208ENST00000530887 Q1T7F1 81 aa5.21□□□□□ -1.58
PSMC3-208ENST00000530887 PSPHP1O15172 72 aa5.2□□□□□ -1.58
PSMC3-208ENST00000530887 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
PSMC3-208ENST00000530887 MT3P25713 68 aa5.11□□□□□ -1.59
PSMC3-208ENST00000530887 ROMO1P60602 79 aa5.11□□□□□ -1.59
PSMC3-208ENST00000530887 A6NED7 52 aa5.09□□□□□ -1.59
PSMC3-208ENST00000530887 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
PSMC3-208ENST00000530887 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
PSMC3-208ENST00000530887 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
PSMC3-208ENST00000530887 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
PSMC3-208ENST00000530887 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
PSMC3-208ENST00000530887 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
PSMC3-208ENST00000530887 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
PSMC3-208ENST00000530887 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
PSMC3-208ENST00000530887 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
PSMC3-208ENST00000530887 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
PSMC3-208ENST00000530887 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
PSMC3-208ENST00000530887 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
PSMC3-208ENST00000530887 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
PSMC3-208ENST00000530887 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
PSMC3-208ENST00000530887 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
PSMC3-208ENST00000530887 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PSMC3-208ENST00000530887 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
PSMC3-208ENST00000530887 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
PSMC3-208ENST00000530887 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
PSMC3-208ENST00000530887 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
PSMC3-208ENST00000530887 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
PSMC3-208ENST00000530887 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
PSMC3-208ENST00000530887 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
PSMC3-208ENST00000530887 INE1O15225 51 aa2.57□□□□□ -2
PSMC3-208ENST00000530887 PRM1P04553 51 aa2.52□□□□□ -2.01
PSMC3-208ENST00000530887 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 215.5 ms