RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 HERC2O95714 4834 aa2.59□□□□□ -2
CTNND1-227ENST00000530748 LOC100996750A0A140TA64 210 aa2.58□□□□□ -2
CTNND1-227ENST00000530748 LRP2P98164 4655 aa2.57□□□□□ -2
CTNND1-227ENST00000530748 PRM1P04553 51 aa2.56□□□□□ -2
CTNND1-227ENST00000530748 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
CTNND1-227ENST00000530748 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
CTNND1-227ENST00000530748 KRTAP9-7A8MTY7 169 aa2.52□□□□□ -2.01
CTNND1-227ENST00000530748 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CTNND1-227ENST00000530748 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CTNND1-227ENST00000530748 MT1AP04731 61 aa2.48□□□□□ -2.01
CTNND1-227ENST00000530748 PCLOQ9Y6V0 5065 aa2.47□□□□□ -2.01
CTNND1-227ENST00000530748 KMT2CQ8NEZ4 4911 aaKnown RBP2.46□□□□□ -2.02
CTNND1-227ENST00000530748 LCE2AQ5TA79 106 aaPredicted RBP2.45□□□□□ -2.02
CTNND1-227ENST00000530748 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
CTNND1-227ENST00000530748 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
CTNND1-227ENST00000530748 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
CTNND1-227ENST00000530748 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
CTNND1-227ENST00000530748 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
CTNND1-227ENST00000530748 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
CTNND1-227ENST00000530748 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
CTNND1-227ENST00000530748 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
CTNND1-227ENST00000530748 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
CTNND1-227ENST00000530748 KRTAP4-9Q9BYQ8 210 aa2.36□□□□□ -2.03
CTNND1-227ENST00000530748 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
CTNND1-227ENST00000530748 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
CTNND1-227ENST00000530748 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
CTNND1-227ENST00000530748 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
CTNND1-227ENST00000530748 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
CTNND1-227ENST00000530748 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
CTNND1-227ENST00000530748 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
CTNND1-227ENST00000530748 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
CTNND1-227ENST00000530748 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.28□□□□□ -2.04
CTNND1-227ENST00000530748 HMCN2Q8NDA2 5059 aa2.25□□□□□ -2.05
CTNND1-227ENST00000530748 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
CTNND1-227ENST00000530748 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
CTNND1-227ENST00000530748 RNF213Q63HN8 5207 aa2.21□□□□□ -2.06
CTNND1-227ENST00000530748 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
CTNND1-227ENST00000530748 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
CTNND1-227ENST00000530748 MUC2Q02817 5179 aa2.11□□□□□ -2.07
CTNND1-227ENST00000530748 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
CTNND1-227ENST00000530748 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
CTNND1-227ENST00000530748 NEBP20929 6669 aa1.97□□□□□ -2.09
CTNND1-227ENST00000530748 KRTAP5-9P26371 169 aa1.95□□□□□ -2.1
CTNND1-227ENST00000530748 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
CTNND1-227ENST00000530748 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
CTNND1-227ENST00000530748 USH2AO75445 5202 aa1.88□□□□□ -2.11
CTNND1-227ENST00000530748 KMT2DO14686 5537 aa1.87□□□□□ -2.11
CTNND1-227ENST00000530748 KRTAP4-6Q9BYQ5 205 aa1.87□□□□□ -2.11
CTNND1-227ENST00000530748 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
CTNND1-227ENST00000530748 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
CTNND1-227ENST00000530748 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CTNND1-227ENST00000530748 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
CTNND1-227ENST00000530748 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
CTNND1-227ENST00000530748 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
CTNND1-227ENST00000530748 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
CTNND1-227ENST00000530748 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
CTNND1-227ENST00000530748 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
CTNND1-227ENST00000530748 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
CTNND1-227ENST00000530748 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
CTNND1-227ENST00000530748 MDN1Q9NU22 5596 aa1.59□□□□□ -2.16
CTNND1-227ENST00000530748 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CTNND1-227ENST00000530748 KRTAP5-3Q6L8H2 238 aa1.55□□□□□ -2.16
CTNND1-227ENST00000530748 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
CTNND1-227ENST00000530748 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
CTNND1-227ENST00000530748 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
CTNND1-227ENST00000530748 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
CTNND1-227ENST00000530748 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
CTNND1-227ENST00000530748 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
CTNND1-227ENST00000530748 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
CTNND1-227ENST00000530748 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
CTNND1-227ENST00000530748 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
CTNND1-227ENST00000530748 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
CTNND1-227ENST00000530748 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
CTNND1-227ENST00000530748 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
CTNND1-227ENST00000530748 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
CTNND1-227ENST00000530748 KRTAP5-7Q6L8G8 165 aa1.08□□□□□ -2.24
CTNND1-227ENST00000530748 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms