RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ROMO1P60602 79 aa5.6□□□□□ -1.51
SRPRA-204ENST00000530680 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
SRPRA-204ENST00000530680 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
SRPRA-204ENST00000530680 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
SRPRA-204ENST00000530680 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
SRPRA-204ENST00000530680 MT1EP04732 61 aa5.47□□□□□ -1.53
SRPRA-204ENST00000530680 DSTQ03001 7570 aaKnown RBP5.43□□□□□ -1.54
SRPRA-204ENST00000530680 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
SRPRA-204ENST00000530680 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
SRPRA-204ENST00000530680 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
SRPRA-204ENST00000530680 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
SRPRA-204ENST00000530680 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
SRPRA-204ENST00000530680 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SRPRA-204ENST00000530680 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
SRPRA-204ENST00000530680 MT1LQ93083 61 aa5.28□□□□□ -1.56
SRPRA-204ENST00000530680 MT1GP13640 62 aa5.27□□□□□ -1.57
SRPRA-204ENST00000530680 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
SRPRA-204ENST00000530680 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
SRPRA-204ENST00000530680 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
SRPRA-204ENST00000530680 MT1MQ8N339 61 aa5.19□□□□□ -1.58
SRPRA-204ENST00000530680 KRTAP15-1Q3LI76 137 aa5.16□□□□□ -1.58
SRPRA-204ENST00000530680 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
SRPRA-204ENST00000530680 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
SRPRA-204ENST00000530680 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
SRPRA-204ENST00000530680 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
SRPRA-204ENST00000530680 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
SRPRA-204ENST00000530680 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
SRPRA-204ENST00000530680 MT4P47944 62 aa5.01□□□□□ -1.61
SRPRA-204ENST00000530680 LCE4AQ5TA78 99 aa5□□□□□ -1.61
SRPRA-204ENST00000530680 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
SRPRA-204ENST00000530680 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
SRPRA-204ENST00000530680 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
SRPRA-204ENST00000530680 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
SRPRA-204ENST00000530680 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
SRPRA-204ENST00000530680 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
SRPRA-204ENST00000530680 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
SRPRA-204ENST00000530680 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
SRPRA-204ENST00000530680 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
SRPRA-204ENST00000530680 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
SRPRA-204ENST00000530680 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
SRPRA-204ENST00000530680 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
SRPRA-204ENST00000530680 MT1AP04731 61 aa4.52□□□□□ -1.69
SRPRA-204ENST00000530680 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
SRPRA-204ENST00000530680 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SRPRA-204ENST00000530680 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
SRPRA-204ENST00000530680 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
SRPRA-204ENST00000530680 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
SRPRA-204ENST00000530680 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
SRPRA-204ENST00000530680 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
SRPRA-204ENST00000530680 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
SRPRA-204ENST00000530680 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
SRPRA-204ENST00000530680 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
SRPRA-204ENST00000530680 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
SRPRA-204ENST00000530680 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
SRPRA-204ENST00000530680 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
SRPRA-204ENST00000530680 MT3P25713 68 aa4.14□□□□□ -1.75
SRPRA-204ENST00000530680 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
SRPRA-204ENST00000530680 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SRPRA-204ENST00000530680 H3BS24 57 aa3.97□□□□□ -1.77
SRPRA-204ENST00000530680 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
SRPRA-204ENST00000530680 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
SRPRA-204ENST00000530680 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SRPRA-204ENST00000530680 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
SRPRA-204ENST00000530680 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SRPRA-204ENST00000530680 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
SRPRA-204ENST00000530680 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
SRPRA-204ENST00000530680 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
SRPRA-204ENST00000530680 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
SRPRA-204ENST00000530680 INE1O15225 51 aa3.08□□□□□ -1.92
SRPRA-204ENST00000530680 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
SRPRA-204ENST00000530680 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SRPRA-204ENST00000530680 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
SRPRA-204ENST00000530680 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
SRPRA-204ENST00000530680 PRM1P04553 51 aa2.88□□□□□ -1.95
SRPRA-204ENST00000530680 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SRPRA-204ENST00000530680 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
SRPRA-204ENST00000530680 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
SRPRA-204ENST00000530680 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms