RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
CAPN1-219ENST00000530495 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CAPN1-219ENST00000530495 A0A1B0GU33 70 aa5.29□□□□□ -1.56
CAPN1-219ENST00000530495 MT1LQ93083 61 aa5.28□□□□□ -1.56
CAPN1-219ENST00000530495 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
CAPN1-219ENST00000530495 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
CAPN1-219ENST00000530495 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
CAPN1-219ENST00000530495 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
CAPN1-219ENST00000530495 UQCR11O14957 56 aa5.2□□□□□ -1.58
CAPN1-219ENST00000530495 PSPHP1O15172 72 aa5.19□□□□□ -1.58
CAPN1-219ENST00000530495 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
CAPN1-219ENST00000530495 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
CAPN1-219ENST00000530495 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
CAPN1-219ENST00000530495 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
CAPN1-219ENST00000530495 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
CAPN1-219ENST00000530495 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
CAPN1-219ENST00000530495 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
CAPN1-219ENST00000530495 A6NED7 52 aa5.07□□□□□ -1.6
CAPN1-219ENST00000530495 A8MU10 97 aa5.05□□□□□ -1.6
CAPN1-219ENST00000530495 TNP1P09430 55 aa5.01□□□□□ -1.61
CAPN1-219ENST00000530495 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
CAPN1-219ENST00000530495 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CAPN1-219ENST00000530495 K7ERS5 55 aa4.97□□□□□ -1.61
CAPN1-219ENST00000530495 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
CAPN1-219ENST00000530495 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
CAPN1-219ENST00000530495 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
CAPN1-219ENST00000530495 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
CAPN1-219ENST00000530495 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
CAPN1-219ENST00000530495 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
CAPN1-219ENST00000530495 H3BS24 57 aa4.87□□□□□ -1.63
CAPN1-219ENST00000530495 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
CAPN1-219ENST00000530495 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
CAPN1-219ENST00000530495 ROMO1P60602 79 aa4.67□□□□□ -1.66
CAPN1-219ENST00000530495 KRTAP25-1Q3LHN0 102 aa4.67□□□□□ -1.66
CAPN1-219ENST00000530495 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
CAPN1-219ENST00000530495 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
CAPN1-219ENST00000530495 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
CAPN1-219ENST00000530495 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CAPN1-219ENST00000530495 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
CAPN1-219ENST00000530495 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
CAPN1-219ENST00000530495 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
CAPN1-219ENST00000530495 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
CAPN1-219ENST00000530495 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
CAPN1-219ENST00000530495 MT1AP04731 61 aa4.48□□□□□ -1.69
CAPN1-219ENST00000530495 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
CAPN1-219ENST00000530495 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
CAPN1-219ENST00000530495 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
CAPN1-219ENST00000530495 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
CAPN1-219ENST00000530495 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
CAPN1-219ENST00000530495 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CAPN1-219ENST00000530495 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CAPN1-219ENST00000530495 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
CAPN1-219ENST00000530495 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
CAPN1-219ENST00000530495 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CAPN1-219ENST00000530495 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
CAPN1-219ENST00000530495 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
CAPN1-219ENST00000530495 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
CAPN1-219ENST00000530495 MT3P25713 68 aa4.12□□□□□ -1.75
CAPN1-219ENST00000530495 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CAPN1-219ENST00000530495 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
CAPN1-219ENST00000530495 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
CAPN1-219ENST00000530495 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CAPN1-219ENST00000530495 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CAPN1-219ENST00000530495 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
CAPN1-219ENST00000530495 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CAPN1-219ENST00000530495 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
CAPN1-219ENST00000530495 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CAPN1-219ENST00000530495 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
CAPN1-219ENST00000530495 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
CAPN1-219ENST00000530495 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CAPN1-219ENST00000530495 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
CAPN1-219ENST00000530495 INE1O15225 51 aa2.93□□□□□ -1.94
CAPN1-219ENST00000530495 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
CAPN1-219ENST00000530495 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CAPN1-219ENST00000530495 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
CAPN1-219ENST00000530495 PRM1P04553 51 aa2.39□□□□□ -2.03
CAPN1-219ENST00000530495 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CAPN1-219ENST00000530495 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms