RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
PDE4DIP-227ENST00000529945 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
PDE4DIP-227ENST00000529945 DNHD1Q96M86 4753 aa3.5□□□□□ -1.85
PDE4DIP-227ENST00000529945 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
PDE4DIP-227ENST00000529945 RYR3Q15413 4870 aa3.45□□□□□ -1.86
PDE4DIP-227ENST00000529945 MT1AP04731 61 aa3.39□□□□□ -1.87
PDE4DIP-227ENST00000529945 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
PDE4DIP-227ENST00000529945 KMT2CQ8NEZ4 4911 aaKnown RBP3.38□□□□□ -1.87
PDE4DIP-227ENST00000529945 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
PDE4DIP-227ENST00000529945 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
PDE4DIP-227ENST00000529945 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
PDE4DIP-227ENST00000529945 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
PDE4DIP-227ENST00000529945 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
PDE4DIP-227ENST00000529945 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
PDE4DIP-227ENST00000529945 HYDINQ4G0P3 5121 aa3.23□□□□□ -1.89
PDE4DIP-227ENST00000529945 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
PDE4DIP-227ENST00000529945 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
PDE4DIP-227ENST00000529945 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
PDE4DIP-227ENST00000529945 HERC2O95714 4834 aa3.17□□□□□ -1.9
PDE4DIP-227ENST00000529945 RYR2Q92736 4967 aa3.13□□□□□ -1.91
PDE4DIP-227ENST00000529945 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
PDE4DIP-227ENST00000529945 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
PDE4DIP-227ENST00000529945 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
PDE4DIP-227ENST00000529945 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
PDE4DIP-227ENST00000529945 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
PDE4DIP-227ENST00000529945 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
PDE4DIP-227ENST00000529945 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
PDE4DIP-227ENST00000529945 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
PDE4DIP-227ENST00000529945 PCLOQ9Y6V0 5065 aa2.99□□□□□ -1.93
PDE4DIP-227ENST00000529945 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
PDE4DIP-227ENST00000529945 HERC1Q15751 4861 aa2.86□□□□□ -1.95
PDE4DIP-227ENST00000529945 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.95
PDE4DIP-227ENST00000529945 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
PDE4DIP-227ENST00000529945 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PDE4DIP-227ENST00000529945 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
PDE4DIP-227ENST00000529945 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
PDE4DIP-227ENST00000529945 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
PDE4DIP-227ENST00000529945 MUC2Q02817 5179 aa2.7□□□□□ -1.98
PDE4DIP-227ENST00000529945 KMT2DO14686 5537 aa2.66□□□□□ -1.98
PDE4DIP-227ENST00000529945 EPPK1P58107 5090 aaKnown RBP2.63□□□□□ -1.99
PDE4DIP-227ENST00000529945 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
PDE4DIP-227ENST00000529945 RNF213Q63HN8 5207 aa2.58□□□□□ -2
PDE4DIP-227ENST00000529945 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
PDE4DIP-227ENST00000529945 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
PDE4DIP-227ENST00000529945 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
PDE4DIP-227ENST00000529945 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
PDE4DIP-227ENST00000529945 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
PDE4DIP-227ENST00000529945 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
PDE4DIP-227ENST00000529945 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
PDE4DIP-227ENST00000529945 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.43□□□□□ -2.02
PDE4DIP-227ENST00000529945 USH2AO75445 5202 aa2.32□□□□□ -2.04
PDE4DIP-227ENST00000529945 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PDE4DIP-227ENST00000529945 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
PDE4DIP-227ENST00000529945 KRTAP5-9P26371 169 aa2.19□□□□□ -2.06
PDE4DIP-227ENST00000529945 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
PDE4DIP-227ENST00000529945 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
PDE4DIP-227ENST00000529945 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
PDE4DIP-227ENST00000529945 NEBP20929 6669 aa1.98□□□□□ -2.09
PDE4DIP-227ENST00000529945 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
PDE4DIP-227ENST00000529945 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
PDE4DIP-227ENST00000529945 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
PDE4DIP-227ENST00000529945 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
PDE4DIP-227ENST00000529945 KRTAP5-3Q6L8H2 238 aa1.77□□□□□ -2.13
PDE4DIP-227ENST00000529945 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
PDE4DIP-227ENST00000529945 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
PDE4DIP-227ENST00000529945 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
PDE4DIP-227ENST00000529945 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
PDE4DIP-227ENST00000529945 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
PDE4DIP-227ENST00000529945 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PDE4DIP-227ENST00000529945 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
PDE4DIP-227ENST00000529945 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
PDE4DIP-227ENST00000529945 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
PDE4DIP-227ENST00000529945 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
PDE4DIP-227ENST00000529945 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
PDE4DIP-227ENST00000529945 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
PDE4DIP-227ENST00000529945 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
PDE4DIP-227ENST00000529945 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 121.6 ms