RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
CTR9-205ENST00000529898 SMR3BP02814 79 aaPredicted RBP1.62□□□□□ -2.15
CTR9-205ENST00000529898 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
CTR9-205ENST00000529898 RYR3Q15413 4870 aa1.59□□□□□ -2.15
CTR9-205ENST00000529898 HERC1Q15751 4861 aa1.59□□□□□ -2.15
CTR9-205ENST00000529898 KIAA1109Q2LD37 5005 aa1.54□□□□□ -2.16
CTR9-205ENST00000529898 MT1HL1P0DM35 61 aa1.54□□□□□ -2.16
CTR9-205ENST00000529898 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
CTR9-205ENST00000529898 BIRC6Q9NR09 4857 aa1.5□□□□□ -2.17
CTR9-205ENST00000529898 ABCA13Q86UQ4 5058 aa1.5□□□□□ -2.17
CTR9-205ENST00000529898 EPPK1P58107 5090 aaKnown RBP1.49□□□□□ -2.17
CTR9-205ENST00000529898 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
CTR9-205ENST00000529898 KRTAP8-1Q8IUC2 63 aa1.48□□□□□ -2.17
CTR9-205ENST00000529898 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
CTR9-205ENST00000529898 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
CTR9-205ENST00000529898 HERC2O95714 4834 aa1.45□□□□□ -2.18
CTR9-205ENST00000529898 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
CTR9-205ENST00000529898 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
CTR9-205ENST00000529898 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
CTR9-205ENST00000529898 M0R2T5 61 aa1.42□□□□□ -2.18
CTR9-205ENST00000529898 PCLOQ9Y6V0 5065 aa1.41□□□□□ -2.18
CTR9-205ENST00000529898 KRTAP12-3P60328 96 aa1.4□□□□□ -2.19
CTR9-205ENST00000529898 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
CTR9-205ENST00000529898 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
CTR9-205ENST00000529898 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
CTR9-205ENST00000529898 MUC2Q02817 5179 aa1.35□□□□□ -2.19
CTR9-205ENST00000529898 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.19
CTR9-205ENST00000529898 UBR4Q5T4S7 5183 aa1.34□□□□□ -2.2
CTR9-205ENST00000529898 SPRR2GQ9BYE4 73 aa1.33□□□□□ -2.2
CTR9-205ENST00000529898 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
CTR9-205ENST00000529898 RNF213Q63HN8 5207 aa1.29□□□□□ -2.2
CTR9-205ENST00000529898 MT2AP02795 61 aa1.28□□□□□ -2.2
CTR9-205ENST00000529898 MT1FP04733 61 aa1.28□□□□□ -2.2
CTR9-205ENST00000529898 MT1XP80297 61 aa1.28□□□□□ -2.2
CTR9-205ENST00000529898 KRTAP19-8Q3LI54 63 aa1.28□□□□□ -2.2
CTR9-205ENST00000529898 MT1BP07438 61 aa1.27□□□□□ -2.21
CTR9-205ENST00000529898 MT1HP80294 61 aa1.27□□□□□ -2.21
CTR9-205ENST00000529898 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
CTR9-205ENST00000529898 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
CTR9-205ENST00000529898 MT1AP04731 61 aa1.19□□□□□ -2.22
CTR9-205ENST00000529898 PRM1P04553 51 aa1.15□□□□□ -2.23
CTR9-205ENST00000529898 KMT2DO14686 5537 aa1.15□□□□□ -2.23
CTR9-205ENST00000529898 SSPOA2VEC9 5147 aa1.15□□□□□ -2.23
CTR9-205ENST00000529898 MT1EP04732 61 aa1.13□□□□□ -2.23
CTR9-205ENST00000529898 KRTAP19-7Q3SYF9 63 aa1.13□□□□□ -2.23
CTR9-205ENST00000529898 USH2AO75445 5202 aa1.11□□□□□ -2.23
CTR9-205ENST00000529898 MT1LQ93083 61 aa1.1□□□□□ -2.23
CTR9-205ENST00000529898 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
CTR9-205ENST00000529898 SPRR2AP35326 72 aa1.05□□□□□ -2.24
CTR9-205ENST00000529898 SPRR2BP35325 72 aa1.04□□□□□ -2.24
CTR9-205ENST00000529898 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
CTR9-205ENST00000529898 MT1MQ8N339 61 aa1.02□□□□□ -2.25
CTR9-205ENST00000529898 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
CTR9-205ENST00000529898 MT1GP13640 62 aa1.01□□□□□ -2.25
CTR9-205ENST00000529898 SPRR2DP22532 72 aa1.01□□□□□ -2.25
CTR9-205ENST00000529898 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
CTR9-205ENST00000529898 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
CTR9-205ENST00000529898 KRTAP19-6Q3LI70 58 aa1□□□□□ -2.25
CTR9-205ENST00000529898 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
CTR9-205ENST00000529898 SPRR2EP22531 72 aa0.97□□□□□ -2.25
CTR9-205ENST00000529898 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
CTR9-205ENST00000529898 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
CTR9-205ENST00000529898 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CTR9-205ENST00000529898 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
CTR9-205ENST00000529898 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
CTR9-205ENST00000529898 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CTR9-205ENST00000529898 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
CTR9-205ENST00000529898 MACF1Q9UPN3 7388 aaKnown RBP0.81□□□□□ -2.28
CTR9-205ENST00000529898 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CTR9-205ENST00000529898 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
CTR9-205ENST00000529898 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
CTR9-205ENST00000529898 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
CTR9-205ENST00000529898 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
CTR9-205ENST00000529898 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
CTR9-205ENST00000529898 MT4P47944 62 aa0.66□□□□□ -2.3
CTR9-205ENST00000529898 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
CTR9-205ENST00000529898 NEBP20929 6669 aa0.58□□□□□ -2.32
CTR9-205ENST00000529898 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 150.5 ms