RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
CCDC90B-216ENST00000529856 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
CCDC90B-216ENST00000529856 SPRR2DP22532 72 aa4.76□□□□□ -1.65
CCDC90B-216ENST00000529856 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
CCDC90B-216ENST00000529856 V9GYY9 64 aa4.76□□□□□ -1.65
CCDC90B-216ENST00000529856 Q1T7F1 81 aa4.74□□□□□ -1.65
CCDC90B-216ENST00000529856 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
CCDC90B-216ENST00000529856 MT1EP04732 61 aa4.71□□□□□ -1.66
CCDC90B-216ENST00000529856 TNP1P09430 55 aa4.71□□□□□ -1.66
CCDC90B-216ENST00000529856 PSPHP1O15172 72 aa4.7□□□□□ -1.66
CCDC90B-216ENST00000529856 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
CCDC90B-216ENST00000529856 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
CCDC90B-216ENST00000529856 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
CCDC90B-216ENST00000529856 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
CCDC90B-216ENST00000529856 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
CCDC90B-216ENST00000529856 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
CCDC90B-216ENST00000529856 K7ERS5 55 aa4.6□□□□□ -1.67
CCDC90B-216ENST00000529856 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
CCDC90B-216ENST00000529856 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
CCDC90B-216ENST00000529856 MT1GP13640 62 aa4.56□□□□□ -1.68
CCDC90B-216ENST00000529856 A6NED7 52 aa4.55□□□□□ -1.68
CCDC90B-216ENST00000529856 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
CCDC90B-216ENST00000529856 MT1LQ93083 61 aa4.52□□□□□ -1.69
CCDC90B-216ENST00000529856 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
CCDC90B-216ENST00000529856 MT1MQ8N339 61 aa4.47□□□□□ -1.69
CCDC90B-216ENST00000529856 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
CCDC90B-216ENST00000529856 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
CCDC90B-216ENST00000529856 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
CCDC90B-216ENST00000529856 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
CCDC90B-216ENST00000529856 ROMO1P60602 79 aa4.32□□□□□ -1.72
CCDC90B-216ENST00000529856 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
CCDC90B-216ENST00000529856 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
CCDC90B-216ENST00000529856 MT4P47944 62 aa4.15□□□□□ -1.75
CCDC90B-216ENST00000529856 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
CCDC90B-216ENST00000529856 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
CCDC90B-216ENST00000529856 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
CCDC90B-216ENST00000529856 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
CCDC90B-216ENST00000529856 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
CCDC90B-216ENST00000529856 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
CCDC90B-216ENST00000529856 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
CCDC90B-216ENST00000529856 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
CCDC90B-216ENST00000529856 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
CCDC90B-216ENST00000529856 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
CCDC90B-216ENST00000529856 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
CCDC90B-216ENST00000529856 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
CCDC90B-216ENST00000529856 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
CCDC90B-216ENST00000529856 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
CCDC90B-216ENST00000529856 MT1AP04731 61 aa3.85□□□□□ -1.79
CCDC90B-216ENST00000529856 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
CCDC90B-216ENST00000529856 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
CCDC90B-216ENST00000529856 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
CCDC90B-216ENST00000529856 MT3P25713 68 aa3.78□□□□□ -1.8
CCDC90B-216ENST00000529856 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
CCDC90B-216ENST00000529856 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
CCDC90B-216ENST00000529856 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
CCDC90B-216ENST00000529856 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
CCDC90B-216ENST00000529856 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
CCDC90B-216ENST00000529856 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
CCDC90B-216ENST00000529856 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CCDC90B-216ENST00000529856 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
CCDC90B-216ENST00000529856 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
CCDC90B-216ENST00000529856 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CCDC90B-216ENST00000529856 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CCDC90B-216ENST00000529856 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CCDC90B-216ENST00000529856 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
CCDC90B-216ENST00000529856 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
CCDC90B-216ENST00000529856 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CCDC90B-216ENST00000529856 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
CCDC90B-216ENST00000529856 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CCDC90B-216ENST00000529856 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
CCDC90B-216ENST00000529856 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CCDC90B-216ENST00000529856 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
CCDC90B-216ENST00000529856 INE1O15225 51 aa2.32□□□□□ -2.04
CCDC90B-216ENST00000529856 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
CCDC90B-216ENST00000529856 PRM1P04553 51 aa2.21□□□□□ -2.06
CCDC90B-216ENST00000529856 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
CCDC90B-216ENST00000529856 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
CCDC90B-216ENST00000529856 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 113.4 ms