RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 MT1EP04732 61 aa5.76□□□□□ -1.49
CCDC90B-215ENST00000529745 A8MU10 97 aa5.75□□□□□ -1.49
CCDC90B-215ENST00000529745 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
CCDC90B-215ENST00000529745 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
CCDC90B-215ENST00000529745 TMEM258P61165 79 aa5.72□□□□□ -1.49
CCDC90B-215ENST00000529745 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
CCDC90B-215ENST00000529745 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
CCDC90B-215ENST00000529745 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.51
CCDC90B-215ENST00000529745 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
CCDC90B-215ENST00000529745 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
CCDC90B-215ENST00000529745 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
CCDC90B-215ENST00000529745 TNP1P09430 55 aa5.61□□□□□ -1.51
CCDC90B-215ENST00000529745 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
CCDC90B-215ENST00000529745 MT1GP13640 62 aa5.59□□□□□ -1.51
CCDC90B-215ENST00000529745 UQCR11O14957 56 aa5.58□□□□□ -1.52
CCDC90B-215ENST00000529745 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
CCDC90B-215ENST00000529745 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
CCDC90B-215ENST00000529745 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
CCDC90B-215ENST00000529745 MT1LQ93083 61 aa5.52□□□□□ -1.53
CCDC90B-215ENST00000529745 MT4P47944 62 aa5.5□□□□□ -1.53
CCDC90B-215ENST00000529745 MT1MQ8N339 61 aa5.48□□□□□ -1.53
CCDC90B-215ENST00000529745 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
CCDC90B-215ENST00000529745 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CCDC90B-215ENST00000529745 V9GYY9 64 aa5.42□□□□□ -1.54
CCDC90B-215ENST00000529745 Q1T7F1 81 aa5.39□□□□□ -1.55
CCDC90B-215ENST00000529745 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CCDC90B-215ENST00000529745 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
CCDC90B-215ENST00000529745 K7ERS5 55 aa5.31□□□□□ -1.56
CCDC90B-215ENST00000529745 PSPHP1O15172 72 aa5.3□□□□□ -1.56
CCDC90B-215ENST00000529745 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
CCDC90B-215ENST00000529745 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CCDC90B-215ENST00000529745 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
CCDC90B-215ENST00000529745 A6NED7 52 aa5.14□□□□□ -1.59
CCDC90B-215ENST00000529745 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
CCDC90B-215ENST00000529745 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
CCDC90B-215ENST00000529745 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
CCDC90B-215ENST00000529745 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
CCDC90B-215ENST00000529745 PCP4P48539 62 aa5.02□□□□□ -1.61
CCDC90B-215ENST00000529745 ROMO1P60602 79 aa4.97□□□□□ -1.61
CCDC90B-215ENST00000529745 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
CCDC90B-215ENST00000529745 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
CCDC90B-215ENST00000529745 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
CCDC90B-215ENST00000529745 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
CCDC90B-215ENST00000529745 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
CCDC90B-215ENST00000529745 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
CCDC90B-215ENST00000529745 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
CCDC90B-215ENST00000529745 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
CCDC90B-215ENST00000529745 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
CCDC90B-215ENST00000529745 MT1AP04731 61 aa4.71□□□□□ -1.66
CCDC90B-215ENST00000529745 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
CCDC90B-215ENST00000529745 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
CCDC90B-215ENST00000529745 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
CCDC90B-215ENST00000529745 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
CCDC90B-215ENST00000529745 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
CCDC90B-215ENST00000529745 BRK1Q8WUW1 75 aa4.42□□□□□ -1.7
CCDC90B-215ENST00000529745 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
CCDC90B-215ENST00000529745 MT3P25713 68 aa4.38□□□□□ -1.71
CCDC90B-215ENST00000529745 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CCDC90B-215ENST00000529745 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
CCDC90B-215ENST00000529745 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
CCDC90B-215ENST00000529745 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
CCDC90B-215ENST00000529745 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
CCDC90B-215ENST00000529745 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
CCDC90B-215ENST00000529745 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CCDC90B-215ENST00000529745 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
CCDC90B-215ENST00000529745 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
CCDC90B-215ENST00000529745 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
CCDC90B-215ENST00000529745 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
CCDC90B-215ENST00000529745 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CCDC90B-215ENST00000529745 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
CCDC90B-215ENST00000529745 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
CCDC90B-215ENST00000529745 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CCDC90B-215ENST00000529745 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CCDC90B-215ENST00000529745 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CCDC90B-215ENST00000529745 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CCDC90B-215ENST00000529745 PRM1P04553 51 aa2.52□□□□□ -2.01
CCDC90B-215ENST00000529745 INE1O15225 51 aa2.25□□□□□ -2.05
CCDC90B-215ENST00000529745 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 208.1 ms