RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
ATPAF1-209ENST00000529214 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
ATPAF1-209ENST00000529214 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
ATPAF1-209ENST00000529214 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
ATPAF1-209ENST00000529214 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
ATPAF1-209ENST00000529214 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
ATPAF1-209ENST00000529214 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
ATPAF1-209ENST00000529214 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
ATPAF1-209ENST00000529214 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
ATPAF1-209ENST00000529214 MT1BP07438 61 aa2.76□□□□□ -1.97
ATPAF1-209ENST00000529214 M0QZ58 72 aa2.69□□□□□ -1.98
ATPAF1-209ENST00000529214 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
ATPAF1-209ENST00000529214 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
ATPAF1-209ENST00000529214 A0A0D9SG42 100 aa2.66□□□□□ -1.98
ATPAF1-209ENST00000529214 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
ATPAF1-209ENST00000529214 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
ATPAF1-209ENST00000529214 MT1XP80297 61 aa2.61□□□□□ -1.99
ATPAF1-209ENST00000529214 KRTAP13-4Q3LI77 160 aa2.6□□□□□ -1.99
ATPAF1-209ENST00000529214 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
ATPAF1-209ENST00000529214 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
ATPAF1-209ENST00000529214 KRTAP10-12P60413 245 aa2.57□□□□□ -2
ATPAF1-209ENST00000529214 KRTAP12-1P59990 96 aa2.56□□□□□ -2
ATPAF1-209ENST00000529214 KMT2DO14686 5537 aa2.52□□□□□ -2.01
ATPAF1-209ENST00000529214 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
ATPAF1-209ENST00000529214 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
ATPAF1-209ENST00000529214 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
ATPAF1-209ENST00000529214 KRTAP8-1Q8IUC2 63 aa2.45□□□□□ -2.02
ATPAF1-209ENST00000529214 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
ATPAF1-209ENST00000529214 NEBP20929 6669 aa2.45□□□□□ -2.02
ATPAF1-209ENST00000529214 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
ATPAF1-209ENST00000529214 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
ATPAF1-209ENST00000529214 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
ATPAF1-209ENST00000529214 SPRR2EP22531 72 aa2.37□□□□□ -2.03
ATPAF1-209ENST00000529214 SPRR2BP35325 72 aa2.37□□□□□ -2.03
ATPAF1-209ENST00000529214 SPRR2AP35326 72 aa2.37□□□□□ -2.03
ATPAF1-209ENST00000529214 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
ATPAF1-209ENST00000529214 TNP1P09430 55 aa2.34□□□□□ -2.03
ATPAF1-209ENST00000529214 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
ATPAF1-209ENST00000529214 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
ATPAF1-209ENST00000529214 MT1EP04732 61 aa2.3□□□□□ -2.04
ATPAF1-209ENST00000529214 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
ATPAF1-209ENST00000529214 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
ATPAF1-209ENST00000529214 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
ATPAF1-209ENST00000529214 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
ATPAF1-209ENST00000529214 SPRR2DP22532 72 aa2.28□□□□□ -2.04
ATPAF1-209ENST00000529214 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
ATPAF1-209ENST00000529214 MT1GP13640 62 aa2.24□□□□□ -2.05
ATPAF1-209ENST00000529214 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
ATPAF1-209ENST00000529214 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
ATPAF1-209ENST00000529214 MT1LQ93083 61 aa2.21□□□□□ -2.06
ATPAF1-209ENST00000529214 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
ATPAF1-209ENST00000529214 MT1MQ8N339 61 aa2.18□□□□□ -2.06
ATPAF1-209ENST00000529214 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
ATPAF1-209ENST00000529214 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
ATPAF1-209ENST00000529214 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
ATPAF1-209ENST00000529214 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
ATPAF1-209ENST00000529214 MT4P47944 62 aa1.99□□□□□ -2.09
ATPAF1-209ENST00000529214 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
ATPAF1-209ENST00000529214 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
ATPAF1-209ENST00000529214 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
ATPAF1-209ENST00000529214 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
ATPAF1-209ENST00000529214 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
ATPAF1-209ENST00000529214 MT1AP04731 61 aa1.88□□□□□ -2.11
ATPAF1-209ENST00000529214 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
ATPAF1-209ENST00000529214 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
ATPAF1-209ENST00000529214 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
ATPAF1-209ENST00000529214 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
ATPAF1-209ENST00000529214 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
ATPAF1-209ENST00000529214 PRM1P04553 51 aa1.73□□□□□ -2.13
ATPAF1-209ENST00000529214 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
ATPAF1-209ENST00000529214 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
ATPAF1-209ENST00000529214 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
ATPAF1-209ENST00000529214 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
ATPAF1-209ENST00000529214 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
ATPAF1-209ENST00000529214 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
ATPAF1-209ENST00000529214 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ATPAF1-209ENST00000529214 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
ATPAF1-209ENST00000529214 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms