RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
ITGB1-218ENST00000528877 SNURFQ9Y675 71 aa2.82□□□□□ -1.96
ITGB1-218ENST00000528877 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
ITGB1-218ENST00000528877 SPRR2DP22532 72 aa2.75□□□□□ -1.97
ITGB1-218ENST00000528877 COA5Q86WW8 74 aa2.74□□□□□ -1.97
ITGB1-218ENST00000528877 COX7CP15954 63 aa2.72□□□□□ -1.97
ITGB1-218ENST00000528877 H7BZZ5 65 aa2.7□□□□□ -1.98
ITGB1-218ENST00000528877 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
ITGB1-218ENST00000528877 SEC61GP60059 68 aa2.68□□□□□ -1.98
ITGB1-218ENST00000528877 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
ITGB1-218ENST00000528877 SERP1Q9Y6X1 66 aa2.67□□□□□ -1.98
ITGB1-218ENST00000528877 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
ITGB1-218ENST00000528877 A0A1B0GU33 70 aa2.65□□□□□ -1.99
ITGB1-218ENST00000528877 MT1EP04732 61 aa2.64□□□□□ -1.99
ITGB1-218ENST00000528877 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
ITGB1-218ENST00000528877 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
ITGB1-218ENST00000528877 A0A0D9SG42 100 aa2.63□□□□□ -1.99
ITGB1-218ENST00000528877 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-218ENST00000528877 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
ITGB1-218ENST00000528877 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
ITGB1-218ENST00000528877 A0A1B0GU69 56 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 ANAPC13Q9BS18 74 aa2.59□□□□□ -1.99
ITGB1-218ENST00000528877 SMIM26A0A096LP01 95 aa2.58□□□□□ -2
ITGB1-218ENST00000528877 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
ITGB1-218ENST00000528877 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
ITGB1-218ENST00000528877 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
ITGB1-218ENST00000528877 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
ITGB1-218ENST00000528877 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
ITGB1-218ENST00000528877 MT1GP13640 62 aa2.54□□□□□ -2
ITGB1-218ENST00000528877 CCDC179H3BU77 68 aa2.53□□□□□ -2
ITGB1-218ENST00000528877 PP632Q6XCG6 107 aa2.53□□□□□ -2
ITGB1-218ENST00000528877 MT1LQ93083 61 aa2.52□□□□□ -2.01
ITGB1-218ENST00000528877 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
ITGB1-218ENST00000528877 MT1MQ8N339 61 aa2.51□□□□□ -2.01
ITGB1-218ENST00000528877 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
ITGB1-218ENST00000528877 TNP1P09430 55 aa2.5□□□□□ -2.01
ITGB1-218ENST00000528877 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
ITGB1-218ENST00000528877 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
ITGB1-218ENST00000528877 TMEM258P61165 79 aa2.48□□□□□ -2.01
ITGB1-218ENST00000528877 UQCR11O14957 56 aa2.44□□□□□ -2.02
ITGB1-218ENST00000528877 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
ITGB1-218ENST00000528877 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
ITGB1-218ENST00000528877 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
ITGB1-218ENST00000528877 MT4P47944 62 aa2.37□□□□□ -2.03
ITGB1-218ENST00000528877 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
ITGB1-218ENST00000528877 V9GYY9 64 aa2.34□□□□□ -2.03
ITGB1-218ENST00000528877 Q1T7F1 81 aa2.33□□□□□ -2.04
ITGB1-218ENST00000528877 K7ERS5 55 aa2.32□□□□□ -2.04
ITGB1-218ENST00000528877 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
ITGB1-218ENST00000528877 PSPHP1O15172 72 aa2.28□□□□□ -2.04
ITGB1-218ENST00000528877 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
ITGB1-218ENST00000528877 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
ITGB1-218ENST00000528877 A6NED7 52 aa2.22□□□□□ -2.05
ITGB1-218ENST00000528877 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
ITGB1-218ENST00000528877 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
ITGB1-218ENST00000528877 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
ITGB1-218ENST00000528877 RPS28P62857 69 aaKnown RBP2.18□□□□□ -2.06
ITGB1-218ENST00000528877 ROMO1P60602 79 aa2.17□□□□□ -2.06
ITGB1-218ENST00000528877 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
ITGB1-218ENST00000528877 MT1AP04731 61 aa2.15□□□□□ -2.07
ITGB1-218ENST00000528877 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
ITGB1-218ENST00000528877 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
ITGB1-218ENST00000528877 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
ITGB1-218ENST00000528877 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
ITGB1-218ENST00000528877 BRK1Q8WUW1 75 aa1.86□□□□□ -2.11
ITGB1-218ENST00000528877 PMAIP1Q13794 54 aa1.74□□□□□ -2.13
ITGB1-218ENST00000528877 PRO0628Q9UI54 55 aa1.62□□□□□ -2.15
ITGB1-218ENST00000528877 KTN1-AS1Q86SY8 53 aa1.57□□□□□ -2.16
ITGB1-218ENST00000528877 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
ITGB1-218ENST00000528877 LUZP6Q538Z0 58 aa1.44□□□□□ -2.18
ITGB1-218ENST00000528877 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ITGB1-218ENST00000528877 PRM1P04553 51 aa1.09□□□□□ -2.23
ITGB1-218ENST00000528877 INE1O15225 51 aa0.9□□□□□ -2.27
ITGB1-218ENST00000528877 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 102.5 ms